We are thrilled to share that our first paper from my new lab, Spateo (https://t.co/a0BC0Cf3Ec) for spatiotemporal modeling of molecular holograms, is now online in Cell: https://t.co/UUZkyXYJtG. Spateo is a comprehensive analytical framework for 3D whole-embryo spatiotemporal modeling. Its advanced features include:
• 3D alignment and reconstruction at the whole-mouse-embryo scale (see the animation).
• 3D spatial domain digitization and cell-cell communication analysis to understand spatial gene expression gradients and both inter- and intracellular communication.
• 3D morphometric and volumetric analyses along with 3D morphogenesis vector field modeling to quantify dynamics such as surface area, volume, and cell density across organs, and to dissect the interplay between morphogenesis factors and cell migration.
• A “Google Earth”-like browser, Spateo-viewer (https://t.co/s33SS7jvYL and https://t.co/BbY6bIJtS0), for interactive and intuitive exploration of 3D spatial data.
• Additional features, such as RNA signal-based single-cell segmentation.
We are also honored that Nature “News and Views” has highlighted this work as well: https://t.co/8F4s6GJeBY.
This is really an amazing outcome after two years' heroic revision process that rewrite the entire paper using a new data (https://t.co/xbahWSeGgx) for whole mouse embryos.
A Master internship (2nd year) in the lab starting from October 2024 for 10 months. Please spread the news.
More informations below
https://t.co/y0Rew9NDuN
Absolutely thrilled to announce that our superstar @benjaminvi99309 successfully defended his thesis !
🌟👏 I'm immensely proud of his hard work and dedication. A heartfelt thank you to the jury members for their invaluable support and insights. #ProudPI@crcl@eddpasquier
@GoetzJacky@crcl Thank you so much @GoetzJacky for your wonderful talk 🤩 and for your presence at my HDR ! Feel so lucky to have had such a great jury 🙏🙏🙏
#southROCK Avec +1000 personnels de recherche, les 2 plus grands centre de recherche en cancérologie français, le @crcl et le @crcm_marseille sont très fiers de faire partie de ce formidable projet. Ensemble nous serons plus fort dans la lutte contre les cancers pédiatriques !💪
📢 We are hiring a highly motivated postdoc in bioinformatics/genomics to join us in @institut_curie and beautiful Paris!
Reach out if you want to decipher the spatio-temporal origins of pediatric brain tumors🧠
Please RT and spread the word!! 🤞
We are recruiting a highly-motivated PhD student to join @INMG in Lyon.
This fully-funded PhD position is starting in January 2024.
Apply if you’re interested in epigenetics and muscle stem cell fate. Please RT. @MYOTWlTTER and @STEMCELLTech
🎉 The latest ERC Starting Grant competition results are out!
400 bright minds have been awarded over €628 million to fund ideas at the frontiers of science & scholarship.
Find out who, where and why 👉 https://t.co/87lIvocJwj
🇪🇺 #EUfunded#FrontierResearch#ERCStG@HorizonEU