HPA CellAtlas

Mikaela Wiking and Frida Danielsson. Tweeting about science & updates from the CellProfiling group @SciLifeLab. Opinions are our own.

[HPA CellAtlas @CellProfiling]

New IF data is available, and choice of cell lines for analysis are now based on RNAseq data. http://t.co/xOdApCVV9Z

[HPA CellAtlas @CellProfiling]

The Human Protein Atlas v11 is now released! http://t.co/xOdApCVV9Z

[HPA CellAtlas @CellProfiling]

Highlight of the week: We will get celebration cake this afternoon! Will let you know why soonish.

[HPA CellAtlas @CellProfiling]

So proud of awesome Dr. Charlotte Stadler for that Nature method publication :)

[HPA CellAtlas @CellProfiling]

Nature Methods: "IF and fluorescent-protein tagging show high correlation for protein loc. in mammalian cells." http://t.co/a1C42E2J81

[HPA CellAtlas @CellProfiling]

Publ. in JPR: "RNA deep sequencing as a tool for sel. of cell lines for systematic subcell. loc. of all hm proteins."http://t.co/BZv4C8L6PW

[HPA CellAtlas @CellProfiling]

Lotsa things going on the group lately. Several publications come out, incl. Nature Method one!

[HPA CellAtlas @CellProfiling]

@jameskelway Thanks! You can't see it amongst sent invitations? Was for the UXD team (12.44pm today). @trello

[HPA CellAtlas @CellProfiling]

@jameskelway Hej, you seem to have invited me to several of your trello boards by mistake. Pls check invite email addresses! /mikaela

[HPA CellAtlas @CellProfiling]

They even want me to reply to Mathias Uhlén's congratulatory email (on release 10.0 of http://t.co/dMHNGd4X) with #wootwoot. I think not.

[HPA CellAtlas @CellProfiling]

On positive side: The release gave me the possibility to introduce "woot woot" at work. Everyone's really excited about the new it-word!

[HPA CellAtlas @CellProfiling]

Also, the HPA project is divided into diff sites. Those at AlbaNova get cake. Yes, we're about upset about not being invited. #lasttweet

[HPA CellAtlas @CellProfiling]

Bad thing about PI:s being at #HUPO2012: We don't get cake nor champagne to celebrate the release. #wegotitlasttime

[HPA CellAtlas @CellProfiling]

Reg. last RT: Our PhD student Charlotte Stadler were among the finalists w 2 images, see eg. http://t.co/jDJaF7EO

[Nature Protocols @NatureProtocols]

Biotechniques had a Proteomics Art Contest! Intrigued, I followed the link... http://t.co/tAPiYogX

[HPA CellAtlas @CellProfiling]

We're really proud about the dictionary (in case you couldn't tell). And the new release. Of course. But mostly the dictionary #myownopinion

[HPA CellAtlas @CellProfiling]

Check out the dictionary at http://t.co/PGTQPbow and the CELLPROFILING DICT. at http://t.co/fIstQKzF #proteinatlas #HUPO2012 woot woot!

[HPA CellAtlas @CellProfiling]

Now w. a dictionary feat. IHC (normal and cancer) and IF images with info about staining and interpretetion. #proteinatlas #HUPO2012

[HPA CellAtlas @CellProfiling]

The new release contains 17k ab:s, corresp. to 14k human genes (～70% of the human genome) http://t.co/dMHNGd4X #proteinatlas #HUPO2012

[HPA CellAtlas @CellProfiling]

The new protein atlas (version 10.0) has been released at #HUPO2012! Go check it out at http://t.co/dMHNGd4X