Dustin Hanke

PhD student @ Kiel University 🇩🇪 - passionate about Bioinformatics and Molecular Evolution 🧬

[Dustin Hanke @DMHanke]

I'm thrilled to share our latest work being out now in @NAR_Open @OUPAcademic, which is also my first first-author paper together with @iwangtoknow and @DaganLab. Check out how #pseudogenes in plasmid genomes reveal past transitions in #plasmid mobility.
https://t.co/MXWGcqNUQq

[Dustin Hanke @DMHanke]

https://t.co/akfYUYRTdd

[Dustin Hanke @DMHanke]

Segmental duplications are challenging to detect. We (@DaganLab) developed SegMantX, a local alignment chaining tool to detect diverged #duplications. Applied to enterobacterial plasmids, it uncovers MGE's role in #plasmid #evolution & #antibiotic resistance amplification. ⬇️

[Paula Ramiro @paula_micro]

Interested in plasmid biology? Our new preprint is now available!!! 🚨

In this work, we analyzed thousands of diverse bacterial plasmids to characterize for the first time one of the most fundamental aspects of plasmid biology: Plasmid copy number. 1/7 👇

[Dustin Hanke @DMHanke]

Inspiring to see what can be achieved without a straight-forward CV. Thank you for this talk @thesteinegger. I'm glad to be here at #ISMB2024

[Dustin Hanke @DMHanke]

@JoaoFTSBotelho @NAR_Open @OUPAcademic @iwangtoknow @DaganLab Thank you!

[Dustin Hanke @DMHanke]

I'm thrilled to share our latest work being out now in @NAR_Open @OUPAcademic, which is also my first first-author paper together with @iwangtoknow and @DaganLab. Check out how #pseudogenes in plasmid genomes reveal past transitions in #plasmid mobility.
https://t.co/MXWGcqNUQq

[Wang, Yiqing @iwangtoknow]

Accidentally I deleted my last tweet about my Ph.D. milestone😅. I have to post it again.

I'm excited to share The evolution of the antibiotic resistance gene islands in plasmids with you.

This time in @NatureComms https://t.co/4OXErR5CNb
Thank you, Tal @DaganLab

[Johannes Köster (@johanneskoester.bsky.social) @johanneskoester]

There have been several new #Snakemake releases in the last weeks. Apart from bug fixes and usability improvements, we introduced support for updating existing files instead of overwriting them (like an sqlite DB): https://t.co/Mez3mkNrfv

[Dustin Hanke @DMHanke]

Hier unser aktueller Beitrag für den Journal Club von
@Spektrum_BIO in dem wir die Bedeutung von #phylogenetischen Analysen zur Klärung der Präsenz von #Cyanobakterien in der Erdgeschichte hervorheben. @DaganLab, https://t.co/nnLJoiFuVh

[Manuel Ares Arroyo @M_AresArroyo]

New preprint alert! 🚨

Our latest work on plasmid mobility with @epcrocha & @NucciAmandine is now available.

Identification of novel origins of transfer across bacterial plasmids.

Read the full paper here:
https://t.co/Ww8KuXyNZf

Thread🧵below!

[João Botelho @JoaoFTSBotelho]

New preprint! Together with @aditibatra92 @FloBuchholz @_jozimmermann and collabs from @EvoEcoGen_ lab, Rupp lab and Tümmler lab, we explored the responses to antibiotics and life-history across #Pseudomonas aeruginosa. #AMR

https://t.co/dbAyOJ0MCq

[Tal Dagan @DaganLab]

Check our new study on organelle pop gen. We started from a model of prokaryotic #plasmid evolution. There are many parallels among extra-chromosomal element across the tree of life. Superb work by Marina and colleagues. Thanks @data_mar!

[Dustin Hanke @DMHanke]

I’m happy to announce that our work from @DaganLab about #pseudogenes in #plasmids is now available as preprint at biorxiv: https://t.co/dfl5ivMn6T

[Dustin Hanke @DMHanke]

What a beautiful place to be #Ferrara. I'm glad to present my poster at #SMBE2023 #SMBE23. I will be presenting my poster No. 379 in the SP venue today in poster session 1.

I'll present my work on frequent gene non-functionalization in plasmid genomes. @DaganLab