Garmire Lab

Official account for Garmire Lab.

[Garmire Lab @GarmireLab]

This is the official Twitter account for Garmire Lab. We will share our works in the account.

[Garmire Lab @GarmireLab]

New preprint "HOMED enables hierarchical and multimodal optimization of DNA methylation deconvolution across tissues": https://t.co/OZvlPSuoh1 HOMED deconvolutes complex tissues such as placenta, with the aid of single-cell data, solving the critical heterogeneity issue in EWAS.

[Garmire Lab @GarmireLab]

@GarmireGroup Congratulations to Yuheng!

[Lana Garmire 🌶 @GarmireGroup]

Havent been very active on X, but my PhD student Yuheng Du passed her PhD thesis defense this week! #proudPI #mentorship

[Garmire Lab @GarmireLab]

Congratulations to Dr. Tay for successfully defending his PhD on March 27th! 🎓Tay has been working on drug repurposing and women's health with dissertation titled: Precision Medicine with Single-Cell and Spatial Transcriptomics: Applications to Preeclampsia
@GarmireGroup

[Garmire Lab @GarmireLab]

Another new paper from our group: "Investigate the Effects of Preeclampsia Severity, Race and Fetal Sex on Subsequent Maternal Complications Using EHR Data From Over 100,000 Pregnancies" with cross-insitutional validation @CedarsSinai @VUMChealth Link: https://t.co/LZOPViZFuw

[Garmire Lab @GarmireLab]

Congratulations to Xiaotong for the GigaScience paper "Cord blood DNA methylation and cell type composition are not significantly associated with severe preeclampsia, after cell type and clinical covariate adjustment". Link: https://t.co/Il9WGgk5Uc

[Garmire Lab @GarmireLab]

The #multiomics and #multiethnic analysis on the impact of maternal #obesity and #cancer risk prediction is officially published on @GigaScience. Check of the paper here: https://t.co/TXPN68fbcH @GarmireGroup

[Lana Garmire 🌶 @GarmireGroup]

😍🥳🤩Our work starting *10 years* ago on #maternal #obesity impact over #multiomics of cord blood in #offspring finally got published today on @GigaScience! I was a fresh new faculty of @UHCancerCenter then! A thread. 1/n
https://t.co/CbGmpadJII

[Afaf Saliba @Afaf_Saliba]

Just published!
Our latest review in "Seminars in Nephrology" summarizing recent advancements, key challenges, and potential solutions in #omics data integration in #nephrology, supporting the goals of #PrecisionMedicine.

Co-authored with Yuheng Du, PhD student at the lab of the great Dr. @GarmireGroup at the @UMich and in collaboration with the talented Tianqing Feng, computational scientist at the Center for Precision Medicine @UTHealthSA!

Grateful for the opportunity to learn from Dr. Garmire, awardee of US Presidential Early Career Scientists and Engineers in 2019!

#MultiOmics #Nephrology #PrecisionMedicine #BiomedicalResearch #GarmireLab #CenterForPrecisionMedicine

Center for precision of Medicine: https://t.co/bDBWFOPziu

@GarmireLab : https://t.co/evfmfSSlr1

@UTHealthSA @UTHSAResearch @UTHealthSAlumni
@UTHealthSA_UP @UTHealthSA_OPA @IIMSCTSA @utsystem @UTHealthSANeph

Take a look 👇👇

[Garmire Lab @GarmireLab]

A huge congratulation goes to Xiaotong Yang, who has been awarded the @umichgradschool 2025 Rackham Predoctoral Fellowship!🎉 🥳👏

[Garmire Lab @GarmireLab]

Congratulations to Yuheng and all co-authors! 🎉The multi-ethnic and multi-omics study on the effect of maternal obesity including the Native Hawaiian population has been accepted in principle for publication in GigaScience. Link to preprint: https://t.co/T049ya1lqE

[Garmire Lab @GarmireLab]

Congratulations to Tay and all co-authors! Originator has been officially accepted for publication in Genome Biology. 🎉"Originator, a computational tool separating single-cell RNA-seq by genetic and contextual information".

[Garmire Lab @GarmireLab]

New preprint from Garmire's Lab (under review at Genome Biology): Originator, a novel tool that deciphers single cells by genetic origin and separates immune cells of blood contamination from those of expected tissue-resident cells. Link: https://t.co/tdtOgmVF24

[Garmire Lab @GarmireLab]

Updated preprint (under review at GigaScience): Leveraging a maternal obesity model for the independent prediction of cancer status in TCGA samples. Explore the intersection of maternal health and cancer biology: https://t.co/T049ya1lqE

[Garmire Lab @GarmireLab]

New pre-print from our group on a unique Native Hawaiian and Pacific Islander (NHPI) cohort examining the impact of maternal pre-pregnancy obesity with multiome: https://t.co/JV6gyuyA6W #Obesity #MaternalHealth #Epigenetics #Multiomics

[Garmire Lab @GarmireLab]

New preprint from Garmire's Lab (under review at Genome Biology): Originator, a novel tool that deciphers single cells by genetic origin and separates immune cells of blood contamination from those of expected tissue-resident cells. Link: https://t.co/tdtOgmVF24

[Garmire Lab @GarmireLab]

New revised preprint from Garmire's Lab: Discover overlooked complications after #preeclampsia from three real-world medical record datasets of over 100,000 pregnancies https://t.co/CnwIit7Tnj Utilizing large-scale #EHR data from @umichmedicine @CedarsSinai and UKBiobank

[Garmire Lab @GarmireLab]

Congratulations to Yijun on reaching such a significant milestone!🎉🥳

[Lana Garmire 🌶 @GarmireGroup]

Belated congratulations to @jenny589446011 who was co-advised by me and Dr. Jian Kang in @umichsph biostat. She graduated with PhD and now is a postdoc with @rafalab. 🤩❤️

[Lana Garmire 🌶 @GarmireGroup]

Belated congratulations to @jenny589446011 who was co-advised by me and Dr. Jian Kang in @umichsph biostat. She graduated with PhD and now is a postdoc with @rafalab. 🤩❤️

[Garmire Lab @GarmireLab]

New pre-print from our group on a unique Native Hawaiian and Pacific Islander (NHPI) cohort examining the impact of maternal pre-pregnancy obesity with multiome: https://t.co/JV6gyuyA6W #Obesity #MaternalHealth #Epigenetics #Multiomics

[Garmire Lab @GarmireLab]

Recent lab outing to celebrate the start of a new school year 🔭🧪🔬🧬 Excited to welcome visiting students from HUST and USTC, along with our new Master’s, PhD students, and RAs this semester! #Bioinformatics #worklifebalance

[Lana Garmire 🌶 @GarmireGroup]

@HaileyBallard20 @dominicklemas and @GarmireLab exploring the utilities of electronic health record data to predict #preeclampsia diagnosis time, using @UMich precision health data and validated by @UFHealth data, is accepted by @jmirpub.
https://t.co/9hihVCI3GC