Garth Ilsley

Ensembl Regulation. EMBL-EBI. Finding ways to improve our regulatory annotation.

[EMBL-EBI Jobs @EMBLEBIjobs]

We're hiring! Join the @ensembl Regulation team as a Bioinformatician! Develop, innovate & maintain genomic pipelines, analyze data, and contribute to cutting-edge research in regulatory genomics. Apply now! #Bioinformatics #genomics
https://t.co/PWk425D9wX

[Garth Ilsley @GarthIlsley]

@wendy_bickmore @cshperspectives @loops_enhancers @ensembl How about different symbols for different annotation intentions? E.g. PAX6 ⤝167 or the like for a targeted enhancer. PAX6 E+167 for a relative naming (irrespective of target). Unique IDs, coordinates and metadata can link these together.

[Garth Ilsley @GarthIlsley]

@APoetsch Congratulations! Happy news indeed.

[Max Staller @maxvstaller]

I came back from vacation to good news: our new paper on transcription factor activation domains came out in Cell Systems! Using rationally designed Gcn4 mutants, we explain why this acidic activation domain is acidic. https://t.co/P6MtLNF0iM @CellSystemsCP

[Giovanni Dalmasso @giodalmasso]

Nice overview on computational modelling in developmental biology by James Sharpe @embl Barcelona on the special issue "on growth and form - 100 years on" --> https://t.co/TLqCeCSKKC @Dev_journal

[Alfonso Martinez Arias @AMartinezArias]

Sharp and clear, Tim Gowers on peer review https://t.co/x3hucyHbA3 … thanks @franknorman for pointing it out. Much to mull over and act upon

[Garth Ilsley @GarthIlsley]

@imartincorena Congratulations Iñigo! Nice work!

[Ben Vincent @benjvincent]

our new paper! enhancers stay modular when they shouldn't, and short-range repression isn't enough to explain it. https://t.co/IMiCFhOANF

[Alfonso Martinez Arias @AMartinezArias]

Be careful how you treat your cells....when you look @ their gene expression https://t.co/y1cfmbbELE experimentally induced gene expression

[Vaquerizas Lab @vaquerizas_lab]

Our work with @ralfhadams is out at @NatureComms! On transcriptional regulators of retinal endothelial angiogenesis https://t.co/l7ycc25tsX

[Piero Carninci @carninci]

No dogma!
Promoters that are enhancers:
https://t.co/UecOz8MhZY
lncRNAs promoters look even more like enhancers:
https://t.co/eiE2i0DR4k

[EMBL @embl]

James Sharpe to be the first Head of #EMBLBarcelona https://t.co/iIr3oGrYQ0

[Eileen Furlong @Eileen_Furlong]

Very excited by our new colleague @embl, @JustinMCrocker. Work on developmental enhancers has just been enhanced! Lots of exciting collabs

[bioRxiv @biorxivpreprint]

Concentration Dependent Chromatin States Induced by the Bicoid Morphogen Gradient https://t.co/ya2vOO0MPL #bioRxiv

[Garth Ilsley @GarthIlsley]

Fascinating stuff! https://t.co/rV8eACIROR

[James Briscoe @briscoejames]

Very cool paper. Lizards, reaction-diffusion equations and skin bling. What’s not to love.
https://t.co/xJPA5VuypD

[Garth Ilsley @GarthIlsley]

The Drosophila Embryo at Single Cell Transcriptome Resolution https://t.co/LAjSOuYe5O