GeneNetwork is a free FOSS FAIR+ web service for genetics, genomics & EHR data. Precision medicine—Like GTEx but more species, realtime stats. Since Jan 1994!
Massive overhauls of GeneNetwork databases to improve speed and to prevent table locks during updates and edits. Now using InnoDB: https://t.co/327XzpzdDa
Terrific presentations by @flavia_villani & @AndresGuarahino in genetics course at UTHSC on the pangenome draft paper
https://t.co/7srdy96Dr5
and paper with @erikgarrison and @v_colonna on cross-chromosome recombination in humans. Yes it happens!
https://t.co/37uOMP3woH
New package from our group: MetabolomicsWorkbenchAPI.jl is a Julia package to work with the Metabolomics Workbench REST service. @GeneNetwork2@OPARProject
CHALLENGE: How to keep genetic and genomic data unidentifiable but sharable?@erikgarrison@pjotrprins and @RichardMott7)are making progress toward this key challenge in individualized health care.
Pangenomes need protection too! Here is Erik’s latest
https://t.co/258jUNQP0m
@sysgenschool And our four groups and their areas of focus.
Of course significant complementarity and intentional overlap.
And your own questions and tests.
@rupertoverall @KMozhui
@sysgenschool Judea Pearl’s #Book of Why definitely worth reading if you are interested in causal modeling and the synthesis @rupertoverall mentioned in presentation. And lots of genetics too. Highly recommended.
https://t.co/NjkrJtkTzL
We develop a method for high-throughput frailty assessment using machine vision is out @NatureAging. We worked with Gary Churchill and @NathanShockCtrs This tech will enable scalable and objective aging studies. Detailed tweet to follow. https://t.co/UOS79KDbQ7
Hey GN coding team— to say but correlations are running VERY SLOWLY today, even against BXD phenotypes. What gives? Took 262 seconds. Is one process competing with another?
I am rebuilding my #rstats blog from the bottom up with #quarto. This will let me use quarto's cool new tricks like tabs and easy columns.
I've already spent hours using quarto's great docs to build a custom blog. If you want to do the same, let me show you what I did.