Senior bioinformatics scientist at Nationwide Childrens Hospital. Using bioinformatics, and high-throughput sequencing to facilitate pediatric cancer research.
Excited to finally share the last chapter of my thesis from @SerreLab - Immune gene expression changes more during a malaria transmission season than between consecutive seasons | Microbiology Spectrum https://t.co/Ujtx5x7T9u
The Fritz Lab is hiring! Looking for a postdoc project lead to investigate the role of structural variants in evolution on short time scales. Please circulate!
Really proud of these two papers led by @JackKucinski and Lex Tallan / collaborative work with my and Ben Stanton’s lab. We wanted to know how PAX3::FOXO1 interfaces with #chromatin in vivo and developed a new #zebrafish model and analytical pipeline to do so. #TeamFishAndChIPs
New review from my group led by graduate students, @JackKucinski and Delia Calderon. Hope you enjoy!
Biological and therapeutic insights from animal modeling of fusion-driven pediatric soft tissue sarcomas https://t.co/ftrHww8xHk
And a great experience working w/ @DMM_Journal.
Ruben Dries @RnDries gave a great talk about #Giotto Suite which provides a great framework for analyzing spatial 🖼️ transcriptomics data
Preprint 🗞️
https://t.co/IX0QuL1l9n
They are hosting a free workshop August 5-7, 2024. Sign up below 👇🏽
https://t.co/WyGPO9OrOH
#FOGBoston
I am recruiting a bioinformatics postdoc for developing bioinformatic pipelines for viral discovery and viromics to start in the Fall 2024.
Please check out the job posting here: https://t.co/GGajRuPmxU
https://t.co/rBRxFX0A19
The Kendall Lab is at #AACR24! Check out our poster presented by Ph.D student Jack Kucinski in the #Pediatric Cancer Genomics and Epigenomics session. Excited to see you all soon!
Excited to finally share our work on how gene expression during #malaria changes with different #host and #parasite parameters. @SerreLab
https://t.co/VCygdl1vMd
Congratulations to Katie Silvius from my group for developing this protocol to make our tp53M214K mutant #zebrafish genotyping more efficient. We hope you find it useful!
A Robust Closed-Tube Method for Resolving tp53M214K Genotypes | Zebrafish https://t.co/sIJChzLJTm
🗣We are hiring a Research Assistant to join our team. We study the developmental biology of pediatric #sarcoma using a cross-species comparative oncology approach (of course including #zebrafish). More info about the position and lab 👇
https://t.co/xaiukJEKqO
Want to hear about the latest updates/new techniques in single cell and spatial genomics? Check out my lab's eighth annual Single Cell Genomics Day on March 29. Keynotes from @IdoAmitLab@JD_Buenrostro and Xiaowei Zhuang. Please RT/spread the word! https://t.co/zG98gkckMU
Just to share, I'm leading an intro to python workshop here at NCH, and made these to hand out to the people who complete it. Thought it was a fun design. I designed the base with #Fusion360 and grabbed the python from #thingiverse.
@davisidarta@humancellatlas A ? so I understand. Are you defining the covariance by summing the % explained by all PCs? It would make sense that using fewer genes would mean a higher % expl. If you had 2 genes it would explain 100%. But that's not fair since you're not expl. the var. in the entire dataset.
Important update! NCBI Datasets will gradually replace the legacy Genome and Assembly resources, which will no longer be available by May 2024. Learn more: https://t.co/MdPnbLbAFi #NCBICGR