ClairS and ClairS-TO get a big performance bump. Check out the new versions and a technical note 🔗https://t.co/1cQea6jTD3 to see how we have improved the performance of ClairS and ClairS-TO with new real cancer cell-line datasets and PoN. 1/
We continue to commit to a unified EPI2ME experience.
We've launched the #EPI2ME cloud enabling EPI2ME in the cloud or locally - data analysis for all.
#nanoporeconf
live from #NCMBOS2024 EPI2ME Cloud is finally released for everyone! we can’t wait to see what incredible bioinformatics analysis you all will do on the platform 🤘🚀
Learning German isn't about studying grammar or memorising Der, Die, Das.
No, it's knowing 3 things:
- when to interject with a solid "Wirklich!"
- when to deliver a devastating "Doch!"
- the optimum exasperated pitch for shouting "HALLO!" while in a supermarket queue.
Lots of new workflow features and updates in this months @nanopore#EPI2ME release. Highlights include Salmonella Serotyping in wf-bacterial-genomes for all your food safety needs, and a new CNV caller in wf-human-variation (Spectre @sedlazeck) and…
https://t.co/cecmqzUpmc
A key skill in bioinfo is assessment of raw seq data. Tools like IGV are useful to view aligned reads & variants. I've manually reviewed 1000s of variants and it's worth knowing what a real variant looks like! From Sirisha in the @nanopore#EPI2ME team:
https://t.co/Ho9bmEZKZ7
VCF files can be annoying to query if you don't know how. Andrea, who is developing our large human workflows which often produce unwieldy VCF files has written a blog post on how to do it:
https://t.co/OMJLIjiyVB
@nanopore#EPI2ME
Absolutely mega release from the @nanopore EPI2ME team including big speed ups for wf-human-variation, a new BAC mode for wf-clone- validation, tumour only more for wf-somatic-variation and many many more improvements and bug fixes!
https://t.co/OIeCbY3J3c
#AGBT#AGBT24
We get lots of questions on how input data should look for analysis with @nanopore EPI2ME workflows, Julian has put together a nice explanation!
https://t.co/Zk4shFoZud
If you have any requests for blog posts we'd be happy to hear your ideas!
We're making bioinformatics more accessible.
With #EPI2ME anyone can now run any @nextflowio workflow — without any bioinformatics experience.
Have a new workflow? Simply import it & share with your non-bioinformatician colleagues to use from the point & click interface. 1/2
You might have thought bed bugs was a very 2023 phenomenon.... wrong. Check out the new @nanopore tool "bed bugs" for the validation and generation of useful statistics from your bed files for adaptive sampling!
tool:
https://t.co/POo9KiXo0R
background:
https://t.co/MBwYv6mNt3