Happy to share our work with @OwkinScience on a daring challenge:
Can #PDAC epithelial and stromal molecular phenotypes be identified from standard histology slides?
Better yet, can this help resolve intra-tumor heterogeneity?
a thread ๐งต
https://t.co/p95nAcd88S
scSNV, from, @jonyeung and co, a method for identifying variants in droplet scRNA-seq data. It takes advantage of molecular duplicates to collapse duplicate reads into longer molecules. It has filters to remove common sources of false positive SNVs https://t.co/S7sMBvlSOY
Mucinous Cystic Neoplasm of the liver
โก๏ธSimilar to its more common counterpart in the pancreas
๐ธ Female
๐ธ Mucinous lining
๐ธ Ovarian-type stroma; ER/PR +
๐ธ May show high grade dysplasia and rarely associated invasive carcinoma
#GIpath#liverpath#pathresidents@PathSpotters
My inaugural case on twitter. A true mixed adenoneuroendocrine carcinoma (amphicrine type) showing bivalent endocrine and exocrine differentiation. The tumour looked like a typical adenocarcinoma with focal areas demonstrating an organoid growth pattern.