Rebecca Senft

Postdoc at the Broad Institute studying image analysis and deep learning. Between analyzing images🔬, video games🎮 and movies, I get a lot of screen time.

[Rebecca Senft @SenftRebecca]

Check out our team’s latest video tutorials that @bdiazrohrer and I put together for i2k: 1) how to use StarDist and CellPose in @CellProfiler and 2) how to classify cells using CellProfiler Analyst.
#imageanalysis

Links:
1) https://t.co/HkjPLPmE4d
2) https://t.co/F8OCv3tMEY

[PLOS Biology @PLOSBiology]

Looking to use quantitative bioimaging in your experiments? Our new Essay from @CiminiLab &co provides a navigational guide for biologists new to quantitative bioimaging, with recommendations and pointers to open source resources. #microscopy #PLOSBiology
https://t.co/VVMajR5r6d

[Beth Cimini Lab 🔬💻 📊 @CiminiLab]

Now in @PLOSBiology! Thanks x♾ to @SenftRebecca, @bdiazrohrer @nasim_jamali @jasonmileskirk @LlopisMontero @VirginieUhlmann
@UWMadisonLOCI @petebankhead @helenajambor @stk_tp, C Brideau, K Gonzales, L Swift, P Colarusso, E Evans III, + @BioimagingNA ! https://t.co/m3AjIXfHyY

[Beth Cimini Lab 🔬💻 📊 @CiminiLab]

Thank you @tuesdaystitches for your amazing work on this! Published paper below, thread from when we preprinted at the link. Reach out if you are interested in Distributing something, it's way easier than you think!

https://t.co/9J2RU8X1qi

[Rebecca Senft @SenftRebecca]

@cytoskeletown Send them our paper 😉 ! We wrote it to be an on-ramp for biologists who are new to quantitative bioimaging and get them thinking about the critical questions for any bioimaging experiment from sample prep through data presentation and analysis. 🔬🧫👩‍🔬 https://t.co/1BlWDfZMkN

[Mario Del Rosario @_mariod]

Want to apply AI to your microscopy with just one click? Check the BioImage Model Zoo community (https://t.co/vjwF3yi1LV). Visit poster 31 for more information @gomez_mariscal @bioimageio #celldyn2023

[Bruno Rodrigues @brodriguesco]

My book is done. I need to write a conclusion to the last chapter and will likely rewrite some paragraphs, but I won't make major changes anymore. So if you're interested in building reproducible analytical pipelines with #RStats, take a look it's free: https://t.co/Vx8LGpddwR

[Rebecca Senft @SenftRebecca]

@NeuroKaiii @AcademicChatter Here’s mine, hosted on GitHub pages: https://t.co/6lM19HReAV

[Oded Rechavi @OdedRechavi]

Peer review

[Beth Cimini Lab 🔬💻 📊 @CiminiLab]

We're hiring for our Postdoctoral Training Program in #BioimageAnalysis! Are you a wet lab biologist who wants to move into computational tools and workflows? Do you love collaborating with others & solving puzzles? Do you want a career-specific training program?

[Rebecca Senft @SenftRebecca]

@AmamotoRyoji Congrats Ryoji!! 🥳

[Wesley @WesleyLowery]

a few thoughts on the videos of Tyre Nichols' killing by Memphis police...

[Beth Cimini Lab 🔬💻 📊 @CiminiLab]

Have been impatiently waiting weeks for today! Can't wait to work with TWO fantastic groups of scientists to help make better imaging and image analysis educational materials, and to help image analysts work better together. Dream come true!

[Louise Reeve @LouiseReeve1]

Sharing this little gem for everyone who has ever suffered through being sent a spreadsheet and told to figure it out... "The “Data Horror Stories Song”, inspired by a tweet by @rogierK and commissioned by @LisaDeBruine: #rstats #S…https://t.co/YO4r9XBcqR

[Rebecca Senft @SenftRebecca]

I also see a trend for less play time during summer but this might have more to do with what games came out then than with something about the month itself (e.g., weather). More to come soon! 😉

[Rebecca Senft @SenftRebecca]

2022 is over so time to begin looking at our video game data! 🎮👾📊 First up is a heatmap of when we played the most:

[Rebecca Senft @SenftRebecca]

Here I’m graphing daily play time summed for myself and my partner. Overall, some months show higher play times during the weekends but I’m a little surprised we seem to play pretty consistently throughout the week during most months.

[Rajendhran Rajakumar @Rajee_Rajakumar]

Co-First authors in sync be like:
@PhDVoice 🏀

[SfN Journals @SfNJournals]

#JNeurosci: Huang et al. @DrexelMedicine found that the raphe GABAergic and newly identified glutamatergic (Vglut3) neurons are better positioned to modulate hippocampal theta activity, in contrast to the raphe serotonergic neurons.
https://t.co/PpDMQuBDXt

[Rebecca Senft @SenftRebecca]

@LlopisMontero I’m so sorry for your loss Paula 😔

[Beth Cimini Lab 🔬💻 📊 @CiminiLab]

A fantastic group of authors, spearheaded by the amazing @SenftRebecca and @bdiazrohrer , have a new preprint for your end-of-year-reading lists! In the 🧵, learn a bit more about "A biologist's guide to the field of quantitative bioimaging" 1/x

https://t.co/Jgwrgz2zAt