Sima Dubnov

PhD student in the labs of Hermona Soreq & Mor Nitzan

[Sima Dubnov @SimaDubnova]

🧵1/9 How do we extract signal-specific information from single-cell data? In our new #CellSystems paper, we introduce bioIB - a method for signal-aware, biologically interpretable compression. With @zoe_piran, Amit Alper, Adi Yefroimsky, Hermona Soreq, supervised by @mor_nitzan

[Sima Dubnov @SimaDubnova]

My first conference as a postdoc might be in Israel after all

[Eran Segal @segal_eran]

ישראלים בחו״ל — בסוף אוקטובר יתקיימו בישראל עשרות כנסים אקדמיים. המועד המדויק (ככה"נ 19 או 26 באוק') ייקבע בקרוב

לרשימת עשרות הכנסים שמתארגנים: https://t.co/CRrhnzBAY4

[Jonathan Karin @JonathanKarin3]

1/7
How are cells spatially reorganized between conditions in tissues?
Introducing CASEI: a method for inferring condition-associated spatial phenotypes in spatial omics data.
w/ Roy Friedman (https://t.co/qm7qK1lBlS) & @mor_nitzan
https://t.co/9SNJZKsOkD

[Sima Dubnov @SimaDubnova]

9/9
Check it out!

Paper ➡️ https://t.co/g7C7bDOA2d

Tutorials ➡️ https://t.co/jKFAwLRCgN

[Sima Dubnov @SimaDubnova]

🧵1/9 How do we extract signal-specific information from single-cell data? In our new #CellSystems paper, we introduce bioIB - a method for signal-aware, biologically interpretable compression. With @zoe_piran, Amit Alper, Adi Yefroimsky, Hermona Soreq, supervised by @mor_nitzan

[Sima Dubnov @SimaDubnova]

8/9
We further demonstrate bioIB in epithelial-to-mesenchymal transition and immune development, uncovering signal-specific gene programs and transitions.

[Ram Gilboa @RamGilboa]

מכון ויצמן

התקבל בוואצאפ, אתן קרדיט אם יהיה

[Eran Segal @segal_eran]

Our lab at the Weizmann Institute was hit tonight by Iran

We will rebuild and return 💪

[Sima Dubnov @SimaDubnova]

6/ P.S. BrainFREEZE was inspired by the fantastic
@nightsciencepod. Can’t recommend it enough! 🎧

[Sima Dubnov @SimaDubnova]

To succeed in science, we must learn to fail. Big discoveries often come from getting comfortable with failure — but no one teaches grad students how to do that. Why don’t we talk more about failure in science? It’s time we start. 🧵

[Sima Dubnov @SimaDubnova]

5/ Sharing what we don’t know is just as important as sharing our wins. It helps us beat frustration and opens the door to real discoveries.

Let’s make academia more honest—and more human—by talking about failure. Share your BrainFREEZE! 🧠❄️