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Applied Bioinf Core
@abcBioinfo
Computational and analytical support for biomedical research
New york
Joined September 2013
119
Following
53
Followers
67
Posts
Applied Bioinf Core
@abcBioinfo
over 8 years ago
@oxpeter
presented a great update on Jupyter Notebooks after attending
@JupyterCon
, see https://t.co/AlWwJbs8ho for the notes!
Applied Bioinf Core
@abcBioinfo
almost 9 years ago
Check out our new website! https://t.co/4DMImWEXks
Applied Bioinf Core
@abcBioinfo
over 11 years ago
"1 million reads provide good accuracy for the abundance of highly-expressed genes" http://t.co/aXJ267YOgP
Applied Bioinf Core
@abcBioinfo
over 11 years ago
A comparison of extraction kits for the isolation of total RNA from small tissue samples http://t.co/rFYTK79Z7f
Who to follow
Mark Fortner
@phidias51
I write software for scientists doing drug discovery and cancer research. Interested in: Java, Micronaut, Web Components, REST, Cancer Biology
Applied Bioinf Core
@abcBioinfo
over 11 years ago
Assessing the effects of low-input RNA-seq http://t.co/CZZJZTqo5e
Applied Bioinf Core
@abcBioinfo
over 11 years ago
Effect of RNA integrity on uniquely mapped reads in RNA-Seq http://t.co/B5boXxZ8Vx
#bmcresearchnotes
Applied Bioinf Core
@abcBioinfo
almost 12 years ago
subSeq: Determining appropriate sequencing depth through efficient read subsampling http://t.co/04RhErMv7f
Applied Bioinf Core
@abcBioinfo
almost 12 years ago
RNA-seq Analysis Reveals Contamination of Multiple Nasopharyngeal Carcinoma Cell Lines with HeLa Cell Genomes http://t.co/F4YM8KIV62
Applied Bioinf Core
@abcBioinfo
almost 12 years ago
An RNA-seq Transcriptome and Splicing Database of Glia, Neurons, and Vascular Cells of the Cerebral Cortex http://t.co/kB2RULtXds
abcBioinfo
retweeted
Olivier Elemento
@ElementoLab
almost 12 years ago
Best Paper award at Usenix Security'14 conf: framework for privacy in pharmacogenomic analyses https://t.co/GxoQ5cdu7f via
@jgiannopoulou
abcBioinfo
retweeted
National Human Genome Research Institute
@genome_gov
almost 12 years ago
The final
#GDS
policy sets expectations for investigators to broadly & sensibly share research data. http://t.co/9xeGHruW7R
#datasharing
Applied Bioinf Core
@abcBioinfo
almost 12 years ago
Omics Pipe: A Computational Framework for Reproducible Multi-Omics Data Analysis http://t.co/W8JTFYGQpJ
Applied Bioinf Core
@abcBioinfo
almost 12 years ago
Correlation coefficient is insufficient at assessing equality in replicates http://t.co/Estn7pSipV
#journalofbiologicalresearch
-thessaloniki
Applied Bioinf Core
@abcBioinfo
almost 12 years ago
Correction of gene expression data: performance-dependency on inter-replicate and inter-treatment biases http://t.co/zmWo8LVG6P
Applied Bioinf Core
@abcBioinfo
almost 12 years ago
Detecting and correcting systematic variation in large-scale RNA sequencing data http://t.co/AmAgWb3Yph
Applied Bioinf Core
@abcBioinfo
almost 12 years ago
Multi-platform assessment of transcriptome profiling using RNA-seq in the ABRF next-gen. sequencing study http://t.co/EOYSgfZnsq
Applied Bioinf Core
@abcBioinfo
almost 12 years ago
A comprehensive assessment of RNA-seq accuracy, reproducibility and information content by the SEQC http://t.co/L4AGRrvrRP
Applied Bioinf Core
@abcBioinfo
almost 12 years ago
Reagent contamination can critically impact sequence-based microbiome analyses http://t.co/2tkdAAjTHD
Applied Bioinf Core
@abcBioinfo
almost 12 years ago
Influence of RNA extraction methods and library selection schemes on RNA-seq data http://t.co/vfV4XpIyA2
#bmcgenomics
Applied Bioinf Core
@abcBioinfo
almost 12 years ago
#PLOSONE
: A Comparative Study of Techniques for Differential Expression Analysis on RNA-Seq Data http://t.co/ScZehMcVYN
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