Adam Rivers, PhD

Computational biologist applying microbiome science and machine learning to agriculture

[Adam Rivers, PhD @adam_rivers]

I'm #hiring for a #postdoc to help develop a bioinformatics tool to search all of SRA quickly and evenly. This will power efforts for agricultural pathogen surveillance and #metagenomics in general. https://t.co/hTtiYSwSjO

[Adam Rivers, PhD @adam_rivers]

Today is the last day to apply!

[IDDjobs: infectious disease dynamics jobs @IDDjobs]

CLOSING SOON: Non academic (Starkville, United States)
Supervisory Research Epidemiologist/Ecologist/Agricultural Engineer (Research Leader) on the mitigation of animal and zoonotic diseases
with @adam_rivers
at @USDA_ARS
More details: https://t.co/JmIpVbZE0J

[Adam Rivers, PhD @adam_rivers]

@IDDjobs @USDA_ARS Today is the last day!

[IDDjobs: infectious disease dynamics jobs @IDDjobs]

CLOSING SOON: Non academic (Starkville, United States)
Supervisory Research Epidemiologist/Ecologist/Agricultural Engineer (Research Leader) on the mitigation of animal and zoonotic diseases
with @adam_rivers
at @USDA_ARS
More details: https://t.co/JmIpVbZE0J

[Adam Rivers, PhD @adam_rivers]

@wildtypeMC Looking forward to it!

[Devin Coleman-Derr @DevinColemanDer]

New postdoc opportunity in the Coleman-Derr lab to study plant microbiome interactions! Details found here.
https://t.co/Mu2SzbWR5c

[Gainesville is for People @GNV4People]

We’re hosting our first meetup on Tuesday, May 24th at 5p at 4th Ave Food Park! Come out and talk housing with us! https://t.co/uRWrDVHbcW

[Adam Rivers, PhD @adam_rivers]

I'm also #hiring for a #postdoc to develop a new graph neural network method to predict genotypes and antimicrobial phenotypes in Salmonella https://t.co/LtmY1kF7Ki

[Adam Rivers, PhD @adam_rivers]

Looking forward to talking about expanding microbiome access in a few weeks

[National Microbiome Data Collaborative @MicrobiomeData]

Our May #CommunityConversation topic is Accessing #Microbiome Research: Data Generation to Analysis.
Join us 🗓️05/04 11am PT with speakers @adam_rivers @USDA, Matt Escobar @CSUSM, @ivanliachko @PhaseGenomics, and Sara Bender.
Register here ➡️ https://t.co/QJA8WIgkZE

[Adam Rivers, PhD @adam_rivers]

@USDA_ARS @UF I posted a thread with more details on our method here https://t.co/Embkd5pnke

[Adam Rivers, PhD @adam_rivers]

1/ We just published #GuideMaker https://t.co/nxta6RvEXq software to bring the power of pooled #CRISPR screening to microbiologists, microbial ecologists, and scientists working with non-model organisms or novel Cas enzymes. What’s pooled CRISPR screening? Read on! 🧵

[Adam Rivers, PhD @adam_rivers]

I'm advising one of these fellowships on methods for petabyte scale sequence search. Feel free to DM me with any questions.

[Agricultural Research Service @USDA_ARS]

Interested in machine learning, geospatial analyses, remote sensing, computer vision, and AI technologies? We have computational science fellowships open for immediate placement. Visit our SCINet page for details and the list of opportunities. https://t.co/dzXLxNLppl

[Agricultural Research Service @USDA_ARS]

Interested in machine learning, geospatial analyses, remote sensing, computer vision, and AI technologies? We have computational science fellowships open for immediate placement. Visit our SCINet page for details and the list of opportunities. https://t.co/dzXLxNLppl

[Adam Rivers, PhD @adam_rivers]

9/ #GuideMaker was written by @raveenpoudel, Lidimarie Trujillo Rodriguez, Chris Reisch, and me with support from @USDA_ARS and @UFResearch. Check out our other projects at https://t.co/nLyJEiAu2a

[Adam Rivers, PhD @adam_rivers]

1/ We just published #GuideMaker https://t.co/nxta6RvEXq software to bring the power of pooled #CRISPR screening to microbiologists, microbial ecologists, and scientists working with non-model organisms or novel Cas enzymes. What’s pooled CRISPR screening? Read on! 🧵

[Adam Rivers, PhD @adam_rivers]

8/ At https://t.co/hMHXRTZwGo you can find information on the command-line version, the web app, and the #CyVerseOrg Discovery Environment versions of #GuideMaker. Go out and get those gene functions!