CellOrganizer

This project provides tools for learning generative models of cell organization directly from images and synthesizing cell images from one or more models.

[Maria Nattestad @marianattestad]

Nice Nature article on visualization in genomics! Some nice discussion from @asiepel of disseminating results through creating new browser tracks, and even a few nuggets at the end from yours truly 😅
https://t.co/rAtBpDyWFF

[Dylan Burnette @MAG2ART]

Cells from a cow.
#CellBiology #microscopy

[CellOrganizer @CellOrganizer]

Working on the next release of CellOrganizer. Everything is going according to plan 😀

[CellOrganizer @CellOrganizer]

NEW RELEASE! CellOrganizer for @galaxyproject v2.8.0 has been released today. This release of the tools is compatible with the latest release and now allows the user to train SPHARM-RPDM models as well as exporting synthetic representations as @sbmlnews Spatial instances.

[CellOrganizer @CellOrganizer]

NEW RELEASE! CellOrganizer v2.8.0 is out! It now supports training and synthesis of SPHARM-RPDM models of nuclear and cell shapes, among other features. CellOrganizer for @Docker and @SingularityApp coming soon! https://t.co/L5UOXTDPc8

[CellOrganizer @CellOrganizer]

CellOrganizer for @galaxyproject will be showcased tomorrow at @MMBioS Cell Modeling Workshop 2019.

[Ray and Stephanie Lane Computational Biology Dept. @CMUCompBio]

Congratulating Dr. Xiongtao Ruan on his successful thesis defense!

[Galaxy Project @galaxyproject]

Building up support for the Google Cloud Platform in Galaxy. New #UseGalaxy blog post by @EnisAfgan & Vahid Jalili https://t.co/GMOMnjM0jA @GCPcloud

[CellOrganizer @CellOrganizer]

Did you know @CellOrganizer for @galaxyproject has been featured in @MMBioS workshops at @AllenInstitute and @psc_live? A chapter on using the tools can be found in the book "Modeling Biomolecular Site Dynamics" from @SpringerNature https://t.co/4ZMeVDEvP3

[CellOrganizer @CellOrganizer]

Want to use #CellOrganizer but don’t have access to @MATLAB? #CellOrganizerforDocker is for you! It consists of compiled executables for the main #CellOrganizer tools inside a @Docker container that can be run on most systems. https://t.co/RbFBYwdwtN

[CellOrganizer @CellOrganizer]

A new member has been added to the #CellOrganizer family. #CellOrganizerforGalaxy brings #CellOrganizer functionality to the @galaxyproject community. A public #CellOrganizerforGalaxy server has also been made available for academic use. https://t.co/nP1IkyRiDF

[CellOrganizer @CellOrganizer]

#CellOrganizer v2.7.2 has been released. The main update is to provide additional functionality to support our first release of #CellOrganizerforGalaxy. A new tool for combining models, slml2slml, has also been added. https://t.co/nP1IkyRiDF

[CellOrganizer @CellOrganizer]

New Release! #CellOrganizer v2.7.1 now includes methods to create informative reports from generative models. And with #CellOrganizer for @Docker, the main tools are available as @MATLAB standalone applications https://t.co/ny6ENds6tf

[LabWorm @TheLabWorm]

Featured now: @CellOrganizer, generative models of cell organization. Vote it up at https://t.co/RJgr9zc8kp! Top 5 voted announced next week

[CellOrganizer @CellOrganizer]

Hello Twitter! #myfirstTweet