Chloé Baum

Find me on bluesky:

[Chloé Baum @ch_baum]

This will be my last post here.
You can find me on bluesky: @chloebaum.bsky.social
See you there!

[Chloé Baum @ch_baum]

🔥 Je viens de reconnecter 24 contacts de #X sur BlueSky/Mastodon ! Exercez votre droit à la portabilité avec #OpenPortability

🎯 0 nouveaux abonnés

➡️ https://t.co/VmMwUAC48m https://t.co/ZhHxuG5Llr

[Ryan Wick @rrwick]

New year, new assemblies!
I'm excited to announce Autocycler, my new tool for consensus assembly of long-read bacterial genomes!
It's the successor to Trycycler, designed to be faster and less reliant on user intervention.
Check it out: https://t.co/NksiyESF7u
(1/5)

[Clément Tanvet @ClementTanvet]

Thrilled to finally meet the brand new Illumina MiSeq i100 series in Paris @Genopole !
@illumina @BiomicsPasteur

[Ryan Wick @rrwick]

I finally got around to testing HERRO (https://t.co/irsWGnjpT2), the new @nanopore read correction algorithm which takes simplex ONT reads to PacBio-HiFi-level accuracy.

I was impressed! Findings are on my blog in a two-part post:
https://t.co/unWf7fIMFS
https://t.co/yEllyimky8

[Chloé Baum @ch_baum]

Always a pleasure to meet and exchange around current sequencing technologies !

[France Génomique @fr_genomics]

Another annual general meeting over for France Genomique ! 144 attendees from 27 platforms came to Evry, and visited the @seqlab and the CNRGH @CEA_Jacob_ Thank you everyone👍

[Aaron Pomerantz, PhD @AaronPomerantz]

A slide is worth a thousand words. At #ASMicrobe, @rrwick shared a fantastic presentation 'In Pursuit of Perfection, bacterial genome assembly from 2016 to today', including this recent Klebsiella isolate genome assembly of 99.99995% identity (Q63.0) using @nanopore data alone

[catharine.aquino @CatharineAquino]

Fantastic and entertaining presentation from Marc Monot @BiomicsPasteur about their @nanopore workflow! Got some really good ideas! #C4LGenomics

[Pedro H Oliveira @pholive81]

I am looking for a highly motivated PhD student to join my team to work on the broad field of microbial epigenomics. Please RT!
https://t.co/K40o3aGYTP

[France Génomique @fr_genomics]

The @seqlab Genoscope @CEA_Jacob_ is looking for a highly motivated Ph.D. candidate to work in microbial epigenomics (bioinfo + wet lab).
The funding is readily available and start date is envisaged to be around Sept/Oct 2024.
https://t.co/6XqceDwDTg

[Chloé Baum @ch_baum]

Exciting sequencing times ahead ! 🧬

[Chloé Baum @ch_baum]

That’s a wrap for #nanoporeconf ! These were 2 days of innovating science, updates and great connections. A pleasure as always!
Thanks London Calling @nanopore

[Ewan Birney @ewanbirney]

After some different iterations, this true thumb drive DNA sequencer is getting scheduled into production ("MinION MkII" I think its offical moniker). The form factor is ...small. The chemistry is "standard ONT". Metagenomics/infectious agent identification anywhere, fast!

[Dessi Veltcheva @DessiVeltch]

Spectacular talk by @ClarksysCorner @UniMelb demonstrating how "@nanopore sequencing 🧬can successfully identify cell types using only #longread sequencing 💻" & scRNA-seq identifies isoform trajectories in #brain development🧠" #nanoporeconf

[Chloé Baum @ch_baum]

Delighted to present my poster on the different ONT activities of @BiomicsPasteur. Come check it out, I’ll be happy to connect and discuss! ☺️
Poster 32.
#nanoporeconf @nanopore

[Chloé Baum @ch_baum]

Very inspiring talk by @CarikaElshae on setting up the very first ONT platform in Bermuda. Allowing breast cancer genetics testing and novel variants detection, leading the path to more therapeutic opportunities.
#nanoporeconf @nanopore

[Chloé Baum @ch_baum]

Day 2 starting now !
@nanopore announcing more workflow stability and more customer support.
#nanoporeconf

[Albert Vilella @AlbertVilella]

@nanopore The announcement of v5 models already happened yesterday: transformer models (same as ChatGPT) with sup-v5 now getting simplex Q25-26.0. Already released in dorado.

[Chloé Baum @ch_baum]

Pumped up for @The__Taybor and the tech updates !
Not forgetting the traditional glass of champagne ✨
#nanoporeconf

[Adrien Leger @AdrienLeger2]

Very excited about the native RNA sequencing session starting now at LC24 #nanoporeconf