Dot Dai

[Karthik Anantharaman @KarthikGeomicro]

Excited to share our latest work on the impacts of using metagenomics vs viromics on viral community ecology and other applications. This work was led by PhD student @j_kosmopoulos. Please share and we are happy for any feedback. https://t.co/ctq15uDnmj

[bioRxiv Bioinfo @biorxiv_bioinfo]

Interactive Tools for Functional Annotation of Bacterial Genomes https://t.co/w9xtq7ORCI #biorxiv_bioinfo

[Sarah Pogieter (MacRae) @Pollymac11]

Providing utilities with reassurance that under the same conditions, drinking water quality will be consistent throughout varying stages of drinking water treatment and distribution. #phdpublished @watermicrobe @fanus_venter @Solize28 @Dot_GLA @EnvSciTech
https://t.co/qgfZZxBXVn

[Anicca Harriot, PhD🔬 @13adh13]

Academic writing is wild bc you’ll read four articles just to write one sentence.

Anyway, here’s a thread of resources I’ve been using to speed through this review I’m working on:

[Pratheepa Jeganathan @PratheepaJ]

Our recent paper, "A Statistical Perspective on the Challenges in Molecular Microbial Biology," is available in arXiv: https://t.co/stdNFlEORq (to appear in JABES)
A reproducible research appendix of the paper is available at https://t.co/JaNCtQTqY3.
@SherlockpHolmes

[Dot Dai @Dot_GLA]

@quendi Works OK for me except R or R studio. I had to re-install xcode-select for several R packages.

[Elizabeth McDaniel @lizilla93]

Excited to release metabolisHMM: a phylogenomics tool for profiling MAGs/genomes with curated and custom HMMs w/ @mcmahonlab & @AnantharamanLab
Preprint: https://t.co/Vhm699TJrN
Wiki/Demo: https://t.co/jURA874w0J

[Dot Dai @Dot_GLA]

@Solize28 @watermicrobe Thanks! 😜

[A. Murat Eren (Meren) @merenbey]

The use of 'mean coverage' data is common in #metagenomics, but contigs w/ identical mean coverages may have distinct stories to tell.

A blog post from Emily Fogarty & @TenderIsTheByte on how to visualize coverage data for those who wish to see more:

https://t.co/e03uvgqWVt

[Karthik Anantharaman @KarthikGeomicro]

Our latest preprint describing VIBRANT, our new approach to identifying and characterizing viruses and proviruses is out! Get genomes, annotations, metabolic genes and more! Fantastic work by @KrisKieft with @ZhichaoZhou_CHN @AnantharamanLab (1/3) https://t.co/UxPzKfRatS

[Mara Averick @dataandme]

🖋 For the LaTeX aficionados…
📝 "Modifying R Markdown's LaTeX styles" by @travisgerke
https://t.co/m34TrkmoCy #rmarkdown

[Sergio Tusso @SerTusso]

looking forward to try it!