Erwann Scaon

Bioinfo / Data Science / Microbiome / Metagenomics
R / SQL / Bash

[archie 🦋 @archieemwood]

okay so why is this such a cool @duckdb feature?

it means you group by multiple different dimensions in one query!

[Erwann Scaon @e_scaon]

{emayili} Support for Mailtrap https://t.co/C6f4Czcun5 via @datawookie

[Erwann Scaon @e_scaon]

@dsdsdnl @holanda_pe @duckdblabs Love the sad truth of last sentence !

[Microbiology Society @MicrobioSoc]

#AccessMicro is proud to launch our negative results collection, celebrating the best negative results studies published since the platform’s launch. Read the introductory editorial by Elisabeth Bik @MicrobiomDigest and browse the collection: https://t.co/TsgeS7BZCJ #OpenScience

[Biofortis @Biofortis_Fr]

[DATA SCIENCE] - Our new data science platform is live on our website !

👉Your data is a goldmine waiting to be explored!

To find out more: https://t.co/qi2lalaAKH

#datascience #AI #IA #machinelearning #CRO #clinicaltrials #health #data #nutrition #microbiome

[Keith Robison @OmicsOmicsBlog]

In the clinical NGS world, what do people use for LIMS/ELN?

Is it pretty much everyone builds their own, or are there commercial systems out there with decent market penetration?

[Science Banana @literalbanana]

the future is so beautiful https://t.co/gNjFk4dL0I

[Lê Nguyên Hoang bsky.app/profile/science4all.org @le_science4all]

Autre conseil : ne tapez pas vos mots de passe pendant vos visioconférences.

L'état de l'art du machine learning est capable de reconstituer une grosse partie de ce que vous tapez à partir uniquement de la bande sonore.
https://t.co/wPrZU98Sl3

[Luka Ivan Jukic @lijukic]

This is the real northern/southern Europe divide

[Open Data Lëtzebuerg @OpenDataLU]

Nous avons interviewé @brodriguesco à propos de son dernier livre "Building reproducible analytical pipelines with R". Pour ses exemples de code reproductible, il réutilise les données ouvertes de l'Observatoire de l'habitat.
https://t.co/xkAIySmRnA

[Erwann Scaon @e_scaon]

Do you remember when you joined Twitter? I do! #MyTwitterAnniversary

[Erwann Scaon @e_scaon]

@mdancho84 There is a more straightforward way to do these now: ggrain (https://t.co/bqWUyO9yfp)

[Erwann Scaon @e_scaon]

@gibbological @BioBohmann @isbsci Very nice work.
Quick question regarding shallow shotgun data from study A. Would it be possible to take advantage of shotgun data to compare which SCFA-related trends can be found using typical shotgun functionnal output (be it GO / Pathway) vs MCMMs SCFA production predictions?

[John Damianos, M.D. @john_damianosMD]

🚨The FDA has approved Vowst, the first orally administered fecal microbiota product for the prevention of recurrence of Clostridioides difficile infection 🦠

#MedTwitter #GITwitter #IDTwitter #Cdiff #microbiome

https://t.co/biYydzYF7w

[Biofortis @Biofortis_Fr]

[EVENT] ✦ DATA SCIENCE CONTEST - VITAFOODS 2023 ✦

🏆 Win a 10-day data scientist consultancy or obtain a 20% discount.

➡️ Submit your project: https://t.co/0wPrbj0B80

🗓 Deadline: May 11th

Find out more: https://t.co/yfFXmMkwK4

#Contest #Datascience #Food #machinelearning

[Erwann Scaon @e_scaon]

@brodriguesco A lot uglier, I did relaunch my docker build 3 times, each time adding the suggested dep on the package that failed to install ^^

[Erwann Scaon @e_scaon]

@jsantoyo @GigaScience Great tool! How do you think it relates to another recently published tool called SCRuB? (https://t.co/G6oU8n2LxN). Are they complementary or competing tools?

[terence @researchremora]

Finally feeling better so here's a forest cover map of France using data from 2019.

#rayshader adventures, an #rstats tale