William McLaren

Ensembl Variation developer aka Mr. VEP

[William McLaren @EnsemblWill]

@ninadoak Have you tried using Docker? https://t.co/JYgWciO1m5
Also you can bypass htslib installation; not required for core functionality

[Ensembl @ensembl]

If you use the #EnsemblVEP, we want your feedback to help us guide future development. Please fill in our survey https://t.co/dQDHBFXB4o

[William McLaren @EnsemblWill]

@ewanbirney @ensembl Also available is a VEP-like tool to use on your own data; Haplosaurus https://t.co/fV9bi4yoc1

[William McLaren @EnsemblWill]

@adamauton @laurastephen @PaulFlicek no plugin AFAIK, but VEP annotates with e! motif features with PWMs from Jaspar

[Ensembl @ensembl]

Jingle VEP, jingle VEP, jingle all the way,
oh, what fun it is to VEP,
download the new code today!
Blog Post: https://t.co/vayiH9s443

[William McLaren @EnsemblWill]

Pre-print edition of the new VEP paper now available! https://t.co/amrA2gJ1Q7

[William McLaren @EnsemblWill]

@aaronquinlan have you tried the “go faster” guide http://t.co/YlhKMK4HDl ? HGVS is a killer too if you can avoid

[William McLaren @EnsemblWill]

@GA4GH spare a thought for those of us waiting for the 1905 from Stansted. 4h delay and counting! #WineTheOnlyOption

[Ensembl @ensembl]

Celebrating 15 years of Ensembl. So proud of what we've achieved and what we will achieve in the future.

[Ensembl @ensembl]

Variant screening (using #EnsemblVEP) shows Sae2 in DNA repair #CitedEnsembl @EMBOJournal http://t.co/CRBtOwz9X9

[Ensembl @ensembl]

Transcriptional reprogramming in melanoma, analysed with #EnsemblVEP @NatureComms http://t.co/9RAfQu5i6E

[Ensembl @ensembl]

21.5M SNPs and indels from Icelandic population, analysed with the #EnsemblVEP @kstefans @ScientificData http://t.co/fgEqA6abJ2

[Ensembl @ensembl]

Sequencing a country: Icelandic variants analysed with #EnsemblVEP and #Compara #CitedEnsembl @nature @kstefans http://t.co/mUgIRsHYqy

[Ensembl @ensembl]

Type 1 diabetes variants in enhancers for lymphoid genes, analysed with #EnsemblVEP #CitedEnsembl @nature http://t.co/ReKYKVJy2E

[Ensembl @ensembl]

Fat pig sequencing: identifying SNPs that influence back fat thickness using #EnsemblVEP and #BioMart #CitedEnsembl http://t.co/wsRZYIr2dW

[Ensembl @ensembl]

Transcriptome analysis for drug effectiveness in breast cancer, using Ensembl genes and VEP #CitedEnsembl @PLOSONE http://t.co/hFFaQCV7F9

[Ensembl @ensembl]

Targeted sequencing for enhancer variants-> cleft palate using #EnsemblVEP + regulatory build #CitedEnsembl @AJHGNews http://t.co/h3fpSmb2Lv

[Ensembl @ensembl]

KLF2 variants in lymphoma, identified from WES of tumours with #EnsemblVEP #CitedEnsembl @LeukemiaJnl http://t.co/QlUJJvzEyx

[Ensembl @ensembl]

ATP4A in familial gastric neuroendocrine tumour, exome sequencing variants analysed with #EnsemblVEP #CitedEnsembl http://t.co/sm3LI1ebP1

[Ensembl @ensembl]

APP in neurological disorders, variants from Hyderabad population analysed with #EnsemblVEP #CitedEnsembl @sciepub http://t.co/Ii1VQPANTW