Efi Papalexi

Senior Scientist at Parse Biosciences | Phd in the Satija Lab at NYU

[Efi Papalexi @epic_genetix]

@MontefioreNYC @SteidlUli @Lindsay_LaFave @AACR @EinsteinMed Wow, congrats Lindsay! This is well deserved 🎉

[Rahul Satija @satijalab]

Our next @cegs_ica Virtual Seminar (12PM on 4/16)

@carol_dalgarno & Longda Jiang use Perturb-seq+@ParseBio+@UltimaGenomics to perturb signaling regulators across cell lines & infer causal regulatory changes from scRNA-seq/spatial data.

Free registration: https://t.co/Q89kEuZgL0

[Rahul Satija @satijalab]

Want to hear about the latest updates/new techniques in single cell and spatial genomics? Check out the full agenda for our Single Cell Genomics Day on Friday, 3/29. All talks will be live-streamed (no registration required) at https://t.co/KJpeGwWLIr

[Nature Biotechnology @NatureBiotech]

Spatial host–microbiome sequencing reveals niches in the mouse gut https://t.co/9zmKYaeZFO

[Parse Biosciences @ParseBio]

Don’t miss our CTO’s talk at #ASHG23

[Efi Papalexi @epic_genetix]

Can’t wait!

[Parse Biosciences @ParseBio]

Are you attending #ASHG23? Don't miss our featured education session with Rahul Satija (@satijalab) from the New York Genome Center. Lunch will be provided for the first 50 attendees.

[Efi Papalexi @epic_genetix]

So excited to be there! Stop by and say hi!

[Parse Biosciences @ParseBio]

Come chat with Efi (@epic_genetix) on November 2nd at #ASHG23 to learn about targeted single-cell transcriptome sequencing in 1 million healthy and leukemic bone marrow mononuclear cells.

[Jan Cools @CoolsJn]

Everything you need to know about single-cell CRISPR screens in this wonderful review article written by Sarah Meyers and Sofie Demeyer. Very proud group leader 😊 https://t.co/HV0l41OD2B #CRISPR #hematology #Research #OpenAccess @vib_ccb @CHG_CME

[Efi Papalexi @epic_genetix]

@Bingjie_Zhang_ Congratulations Bingjie!

[Efi Papalexi @epic_genetix]

@rosslevinemd @RossLevineLab @MSKCancerCenter Congrats, happy 16th birthday! 🎉👏

[Efi Papalexi @epic_genetix]

@k3yavi @TheWistar Congrats Avi, wonderful news!

[Efi Papalexi @epic_genetix]

@johnomix @DonnellyCentre @UofT This is great news! Congratulations John 👏🎉

[Rahul Satija @satijalab]

Our next @cegs_ica virtual seminar is 6/20 at 12PM ET
@JBlairSci will present 'Phospho-seq', a multimodal, sequencing-based approach that reveals intracellular protein profiles as well as cell signaling dynamics and more in single-cells.
Free registration: https://t.co/jpHVApYsai

[Rahul Satija @satijalab]

Two new methods for integrating single cell data across modalities in @NatureBiotech!

1. Mosaic integration (@shazanfar/@MarioniLab) to 'hop' across datasets: https://t.co/tROOa5U8bb

2. Our bridge integration (@YUHANHAO2) implemented in Seurat v5: https://t.co/OLnvPriAia

[Efi Papalexi @epic_genetix]

Looking forward to presenting our Evercode TCR kit. Want to learn how to characterize the whole transcriptome and TCR repertoire of 1 million single cells? Come to my talk at 1:45pm on Friday, May 12th, room 206 #AAI2023

[Rahul Satija @satijalab]

We are excited to release Seurat v5- with new methods for multimodal, spatially resolved, and massively scalable single-cell analysis. https://t.co/7BMGF7x1wV

[Efi Papalexi @epic_genetix]

Woohoo 🎉 awesome new method to measure intracellular proteins in single cells 👏

[Rahul Satija @satijalab]

We are excited to introduce Phospho-seq, our approach for profiling intracellular protein and cell signaling dynamics alongside additional molecular modalities in single cells!

Check out @JBlairSci's preprint at https://t.co/LANumW2Ko4

[Rahul Satija @satijalab]

Interested in single cell genomics but need help getting started? Check out my lab's Single Cell Genomics Day on April 7. Talks will feature recent exciting computational and experimental advances and will be livestreamed at https://t.co/zG98gkckMU. Please RT/spread the word!

[Rahul Satija @satijalab]

Our next @cegs_ica virtual seminar will be on 2/28 at 12PM ET

@Bingjie_Zhang_ will present her work measuring and integrating single-cell ATAC, RNA, protein, TCR, and dextramer data to characterize T cell responses to COVID vaccination

Free registration: https://t.co/rXVIeFl2oP

[Rahul Satija @satijalab]

New preprint w/@anshulkundaje introducing CPA-Perturb-seq! We systematically perturb regulators of cleavage and polyadenylation, and explore post-transcriptional changes at single-cell resolution. Led by @mh_kowalski @harm__w and @jjohlin (🧵)

https://t.co/GQwKMQhlpX