Aaron Feller

[Aaron Feller @feller_al]

@HuggingModels Why not use RAG…?

[Aaron Feller @feller_al]

Big changes coming in BioML with API inference following along in the path in NLP -- I read this as, LLMs for biology are here to stay.

[Ankit Gupta @agupta]

Big day today at @Ginkgo: we're pulling back the curtain on our proprietary biological foundation models and launching a model API!

Our API will support private and open models, and we're pricing it competitively to enable others to build on top of it.

Details in 🧵👇

[Aaron Feller @feller_al]

@ml4proteins @proteinrosh @EvoscaleAI I never received an email link! Is it still coming?

[Aaron Feller @feller_al]

⁦@Google⁩ Apparently Brutus had a retrial.

[Aaron Feller @feller_al]

@jxmnop Plenty of cross attention projects in bio space.

[Aaron Feller @feller_al]

@IAmMatan @_akhaliq Every new method for detection can be used as a fine tuning mechanism for making the models more humanlike.

[Aaron Feller @feller_al]

@soumithchintala Throw a couple at your friendly neighborhood academic institution... currently working with TWO A100s.

[Aaron Feller @feller_al]

@waitbutwhy Just finished! Great work.

[Aaron Feller @feller_al]

@bsenser @svpino From the article:

"There are a number of very good open-source libraries if you want to start your journey in TDA."

scikit-tda: https://t.co/HnxLnbTRCM
giotto-tda: https://t.co/a2W804GoXI
Mapper: https://t.co/huKWNWeBMX

... All available on GitHub. Not open source enough?

[swyx @swyx]

🆕 Essay: The Rise of the AI Engineer

https://t.co/J91uijDMBB

Keeping up on AI is becoming a full time job.

Let's get together and define it.

[Aaron Feller @feller_al]

Recently published work! The project was led by @kosonocky and is available on arXiv: https://t.co/4tMo3Bk0f6

[Clay Kosonocky @kosonocky]

What if we used prompt engineering on Chemical Language Models to help us discover new molecules?

In our paper, we developed a novel SMILES-based prompt engineering strategy that was able to identify structurally distinct functional analogues of small molecules.

🧵(1/11)

[AK @_akhaliq]

Reddit thread: https://t.co/myVY3tHSFF

[David de Sancho @daviddesancho]

Did @DeepMind's Alphafold solve the protein folding problem in 2021?

How I changed my mind

1/n

[Michael Nielsen @michael_nielsen]

Considering examples of "emergence" in abilities of LLMs as model size is increased

In the early days of BEC I remember someone remarking "turns out the thermodynamic limit is just a few hundred atoms". Not so in LLMs!

[Tivadar Danka @TivadarDanka]

I described some of the most beautiful and famous mathematical theorems to Midjourney.

Here is how it imagined them:

1. "The set of real numbers is uncountably infinite."

[Aaron Feller @feller_al]

@jivarahasya Hello! Are you taking on PhD candidates? I am a biochemist currently working in novel phage defense systems, exploring a newly identified small molecule interaction, and am building up my computational expertise.

[Aaron Feller @feller_al]

#AlphaFold full code is now available… Anyone at @ASU and/or @ASUBiodesign working on getting this set up?

I’d love to help set up a submission protocol so any lab can submit without much coding knowledge.

[nature @Nature]

Nature has published the latest iteration of AlphaFold, a computational approach employing machine learning for predicting full-chain protein structure with high accuracy. https://t.co/8AFXh96gIv