Francesco Andreace

PhD Candidate ALPACA 2020 ITN
Sequence Bioinformatics @institutpasteur Paris
Human Pangenomics
Views are my own

[Francesco Andreace @frnandreac]

It was nice to give a little contribution to this k-mer project :)

[Alec Stapp @AlecStapp]

Guess what France did in the 1970s

[James Ferguson @Psy_Fer_]

I don't want some AI bot that codes, does art, writes music or a book.

What I want is a robot that cleans my damn house so I can have more time to do those things myself.

[Manuel Ares Arroyo @M_AresArroyo]

New preprint alert! 🚨

Our latest work on plasmid mobility with @epcrocha & @NucciAmandine is now available.

Identification of novel origins of transfer across bacterial plasmids.

Read the full paper here:
https://t.co/Ww8KuXyNZf

Thread🧵below!

[Giorgio Gori @giorgio_gori]

È ufficiale. Ci stanno prendendo in giro.
#GovernoMeloni #balneari

[Institut Pasteur Education @PasteurEdu]

Honored to share an extraordinary day with Dr.Anthony Fauci! His insights on science, public health, and education inspired us.The engagement with doctoral students was a highlight, showcasing the incredible potential of the next generation in shaping the future of global health

[Francesco Andreace @frnandreac]

Two days ago I had the honor to take a coffee with Dr Anthony Fauci before his keynote lecture on 40 years of HIV at @institutpasteur, together with other 9 selected phd students and postdocs. It was a privilege to ask him questions about policymaking and pandemic preparedness

[Francesco Andreace @frnandreac]

Pangenome graphs are a powerful tool: choosing the right one for your application is paramount. Have a look at the characteristics of state-of-the-art tools! The reviewed article is now published on Genome Biology! https://t.co/ewHMWnR9hC

[Francesco Andreace @frnandreac]

The construction of large cohorts human pangenome graphs is a challenging task. We selected 5 different state-of-the art tools that generate variation graphs or De Bruijn graphs and used them to construct a human pangenome of 104 high-quality human haplotype assemblies. (1/4)

[Francesco Andreace @frnandreac]

It is now available on Genome Biology! https://t.co/ewHMWnR9hC

[Francesco Andreace @frnandreac]

The construction of large cohorts human pangenome graphs is a challenging task. We selected 5 different state-of-the art tools that generate variation graphs or De Bruijn graphs and used them to construct a human pangenome of 104 high-quality human haplotype assemblies. (1/4)

[bioRxiv @biorxivpreprint]

Construction and representation of human pangenome graphs https://t.co/S7as2LjUSa #bioRxiv

[Francesco Andreace @frnandreac]

Here you can find the preprint: https://t.co/ec3HUXXW4a .

[alban denoyel @albn]

My bet is Jesse gets the role

[Francesco Andreace @frnandreac]

Super thread by @camiladuitama1 on her PhD journey and the metagenomics methods she developed! If you are interested in ancient metagenomics contact her! She is super cool and can give you nice books recommendations as well!

[Yoann Dufresne @yoann_dufresne]

With plenty of colleagues, we are happy to introduce bioconvert, a software to convert bioinformatics files from one format to another. bioconvert currently includes 50 formats and 100 converters.

[Sanju Sinha @Sanjusinha7]

Spending millions of $, Grail created a TCGA-like study to systematically answer the following:

What is the best cell-free DNA method to detect cancer from blood?

17 things we learned.🧵🩸