Top Tweets for #Metatranscriptome
A 2024 study in Exp Ther Med used Magigene’s #Metatranscriptome sequencing service to analyze DSS-induced colitis, revealing XAV939 inhibits Wnt/β-catenin signal pathway. (Impact Factor: 2.4)
🔗Paper: https://t.co/UCIOniWJjd
🔎Magigene’s solutions: https://t.co/cocynx8xZw
Paper out in @BioMedCentral
1/ 🌱 We did a first #metatranscriptome study on #biofilm succession in the #soil #plastisphere and tracked #polyethylene (PE) plastics in soil over 53 days. Insights into biofilm dynamics, #plasticdegradation, and nitrogen fixation ahead! 🧵
Evaluation of commercial RNA extraction kits for long-read metatranscriptomics in soil. #nanopore #metatranscriptome
https://t.co/b0GmD97Pq3
New NIOO publication: Impact of the fungal #pathogen Fusarium oxysporum on the taxonomic and functional diversity of the common bean root #microbiome, by @lwmendes and others. #rhizosphere #endosphere #metagenome #metatranscriptome
https://t.co/fxTnOmM9sS
📢New Review alert for virus aficionados
Current trends in RNA virus detection through metatranscriptome sequencing data
🔓https://t.co/adV9KHtiX3
#RNAvirus #VirusDetection #Metatranscriptome #RNAvirome #Bioinformatics #Virology
The new issue of @genomeresearch is now live. Follow the link to new research on m6A RNA methylation following #SARSCoV2 infection, spatial #metatranscriptome and strand-specific RNA sequencing, and more! https://t.co/HNmpo8pFSw
Recent advances in '#soil #viromics', that is, virus-focused #metagenome and #metatranscriptome analyses that offer unprecedented windows into the soil #virosphere. [review co-authored by EVBC member @simroux_virus] https://t.co/ydr3DVmOSU #bacteriophages #viralecology
In @CellCellPress: "#Metatranscriptome mining reveals a major expansion of #RNAVirus diversity"
#microbiota #bacteriophage #virus #ViralEcology
@UriNeri2 @ugophna @simroux_virus @mkrupovic @apcamargo_ @kyrpides @TelAvivUni @jgi @NCBI
👇
https://t.co/sResVNdQvi
Open #Bioinformatics Research Associate position (m/f/d) in the field of #metatranscriptome analysis in #leukemia @jlugiessen @FB08_JLU. For more information see: https://t.co/8n5jh1mApH
Glad to share our last gut #microbiome study in collab with Chays Manichanh @vallhebron ⬇️
"Human gut #metatranscriptome changes induced by a fermented milk product are associated with improved tolerance to a flatulogenic diet" @DanoneResearch
https://t.co/QEQthUOMmf
@DrKathrynElmer @NCBI this is a very good point, thank you @DrKathrynElmer.
I think I will go with that.
Raw data is going on @NCBI's SRA, then the #metatranscriptome assembly on @datadryad.
Best place to upload a #metatranscriptome #assembly?
(i.e., #RNAseq reads from environmental sample, assembled into a multiple-species assembly?)
I figure this is useful for reproducibility, but possibly @NCBI is not the location? #eRNA
https://t.co/0zPRgl8hGD
Any ideas? Thanks!
Happy to share our (@Fede917119011 @silvio_silvio75 @PeyrinBiroulet ) last preprint! We hope #IBD #TaMMA will expedite the profiling of the IBD-associated #transcriptome and #metatranscriptome in the most accessible and easy way. Enjoy it at https://t.co/J6b5Tg274W
Unraveling the lung #metatranscriptome in #HCT and associated #lunginjury @BloodJournal Nice commentary on our collab paper @UCSFChildrens @prinsesmaximac @sloan_kettering
https://t.co/Q1VC7lDbY8 https://t.co/PhpWxvsH77
Congrats to our postdoc fellow @YanYan20444341 for awarding the Charles King Trust Fellowship! Yan will study the strain-level epidemiology and diet-linked gut #metatranscriptome risk factors in #colorectal cancer.
#metatranscriptome analysis of DsrABC-sulfite reduction and DHPS/isethionate sulfite-lyase activities suggested Bilophila and other Desulfovibrionaceae use mostly #taurine but also #DHPS for #H2S production in the human gut
Please vote for my graphical abstract on Biorender!
#biorender #aquatic #microeukaryotes #metatranscriptome #geneexpression #environment
https://t.co/IbKzzNvt4q
Good overview of two important studies of our oceans. #phytoplankton #algae Lots of data to unpack #metagenome #metatranscriptome #microscopy
Here are a #microbial #metagenome & #metatranscriptome collection gathered during an unusually intense dinoflagellate bloom in Monterey Bay, CA, USA in 2016, for studies of #marine #bacterial communities during episodic #phytoplankton blooms.
https://t.co/CFnRWgJprn
@LauraTreu @AriannaBasileCC @DiBio_UniPD @LauraTreu presenting the #genome-centric #metatranscriptome study on #Anaerobic #digestion system at #SIMGBM in Florence 2019! Great work! @DiBio_UniPD @IriniAngelidaki @kougias
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