Top Tweets for #SubCellBarCode
Happy to announce that all tools and data related to our #SubCellBarCode project have been gathered in one place on @scilifelab Data Platform!π
Just start digging through the material!
https://t.co/iymhpSLwgC
For a quick recap of the method, see the thread below!π
Good news for anyone interested in protein localization! The #proteomics workflow behind the https://t.co/27i6c82IHU resource is now out in @NatureProtocols! π
Key features: the protocol covers wet lab, #MassSpec, #bioinformatics & applications π§΅1/6
https://t.co/pA5I0zhLfv
#FeaturedProtocol this week is for #SubCellBarCode - an iIntegrated workflow for robust #spatialproteomics by #massspec https://t.co/KVp0e5rhue @LM_Orre @lehtiolab
New post I finally got around to finishing. My 10 favorite #proteomics papers of 2019. I've curated a list with a brief review for each of the papers I found interesting from last year (in no particular order). π #science #sciencetwitter #research 1/11
https://t.co/iQD0fBnh2k
Interesting!
It looks like the #HiRIEF #proteomics method that we used to generate the data for the #SubCellBarCode project (PXD006895) has a very high potential for reaching even deeper into the peptidome, further improving the protein sequence coverage. We just need faster MSπ
Please take a chance to meet @LM_Orre and get more detail information from our recently @MolecularCell paper https://t.co/tvgI53ROZ3. And do not miss the opportunity to explore the #SubCellBarCode resource https://t.co/oUBBWhsJmn.
Cell and Tumour Biology Seminar: SubCellBarCode: Proteome-wide Mapping of Protein Localization and Relocalization: Speaker: Lukas Orre, Onk-Pat, KI Host: Lars-Gunnar Larsson https://t.co/lQu7xtk04C
Similar enrichment analysis can of course also be performed at the #SubCellBarCode webpage https://t.co/tktt9vbA49 also donβt miss the underlying article in @MolecularCell
Happy to see that our #SubCellBarCode #proteomics data is now uploaded in Enrichr database to enable #bioinformatics and enrichment analysis focused to subcellular localisation π
https://t.co/TJ6cVLctYQ
Interested in #Transcription? Investigate co-localization of 792 Transcription factors, 296 co-factors and 117 chromatin remodeling proteins in #SubCellBarCode @MolecularCell https://t.co/G1hWQumDpf or through @lehtiolab https://t.co/27i6c82IHU
Where is the #E3ligase? There!
Explore #subcellular location of 342 Ubiquitin E3 ligases and investigate the #ubiquitin #proteasome system in #SubCellBarCode @MolecularCell https://t.co/G1hWQumDpf
or through @lehtiolab https://t.co/27i6c82IHU
Where is the #kinase? There!
Explore subcellular location of 325 kinases in #SubCellBarCode @MolecularCell https://t.co/G1hWQumDpf
or through @lehtiolab https://t.co/27i6c82IHU
Do not miss the opportunity to explore the #SubCellBarCode resource!
BarCode app for localization of individual proteins in 5 Cell lines
CoLocal app for colocalization analysis
NetWork app for browsing protein families
and more at https://t.co/27i6c82IHU
@cdsouthan @scilifelab @HumanProteome The #SubCellBarCode project and resource is independent from @HumanProteome Atlas and there is no plan to merge the resources. Our data is easily digested at https://t.co/27i6c82IHU , but weβll talk to our next door neighbors on linking the resources.
@MolecularCell Happy to see a lot of interest in the #SubCellBarCode article and resource. I hope our efforts will come to good use.
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