Top Tweets for #cellprofiler
Do you work with open-source #imageanalysis software such as #cellprofiler, #napari, or #ilastik and wish you could chat with an expert 1:1 regarding your project or your image analysis pipeline? Sign up by Jan 17, 2025 at https://t.co/2XU9pbnExM to join Call4Help by GloBIAS!
🚨 @GloBIAS_ is launching Call4Help: personalized guidance 4 image analysis challenges! 🌟
📅 1st session: 20–24 Jan 2025
💡 Tools: #Napari, #Ilastik, #CellProfiler
🌍 Expert-led, global time zones
🔗 Apps open 6 Jan. Share your insights: https://t.co/uYd98V153Y
#ImageAnalysis
Workshops from #VirtualI2K2024 are now live on their youtube channel! https://t.co/s651rhiNI4 Playlist includes tutorials on #cellprofiler #qupath #cellpose #napari #instanseg #fiji #deeplearning for #microscopy and many more! #bioimageanalysis
So great to be a part of the #machinelearning in #drugdiscovery symposium of
@broadinstitute
and to be able to share the role of #cellprofiler and #morpheus in gaining biological insights from images!
Excellent learning opportunity for #bioimageanalysis enthusiasts! Virtual I2K 2024 https://t.co/onLGfeUDcV (Oct 28-30) will be hosting >30 free workshops on open-source image analysis tools including #cellprofiler #piximi #qupath #fiji #napari #trackmate 🧵
Delighted to have shared the power of #CellProfiler with the African Bioimaging Consortium. Thanks to @ScopeShifu and @CiminiLab for the opportunity! The participants were amazing!
#ImageAnalysis #BioimageAnalysis
Join the CellProfiler Workshop jointly hosted by the African Bioimaging Consortium and the Cimini Lab at the @broadinstitute!
Only 20 spots available – apply by 14th August 2024!
Click to apply: https://t.co/zLA9OAToSb
@RArgelaguet We also show that ExIF massively improves the structure of t-SNE, UMAP & PHATE manifolds based on quantitative single cell feature measurement using #CellProfiler (thanks to @DrAnneCarpenter for the gift that keeps on giving).
Remainings from the workshop I organized for to my Postdoc lab on “How to Cell Profiler” … and some other random doodles of cats that were just there.
#cellprofiler #imageanalysis
Don't miss @Le__Liu's #PlantBio2024 poster. Very interesting work! @facette_lab @CiminiLab @aribidopsis @NewPhyt @broadinstitute @frontiersin #stomatalphysiology #grassstomata #cellprofiler @plantae_org @ASPB_ECPS @ASPB_WiPB @EnvEcoPlant @UMass_PlantBio @ASPB @ASPB_PUI
Don't miss @Le__Liu's #PlantBio2024 poster. Very interesting work! @facette_lab @CiminiLab @aribidopsis @NewPhyt @broadinstitute @frontiersin #stomatalphysiology #grassstomata #cellprofiler @plantae_org @ASPB_ECPS @ASPB_WiPB @EnvEcoPlant @UMass_PlantBio @ASPB @ASPB_PUI
This is a fantastic introductory post for anyone interested in using #cellpose or #StarDist within #Cellprofiler! ⤵️
Do you use CellProfiler to analyse your images and have been curious to experiment with deep-learning-based segmentation algorithms (#Cellpose and #StarDist)? I wrote a blogpost https://t.co/Rnf9UMGMQ1 to help complete beginners use these plugins in #cellprofiler! #imageanalysis
Do you use CellProfiler to analyse your images and have been curious to experiment with deep-learning-based segmentation algorithms (#Cellpose and #StarDist)? I wrote a blogpost https://t.co/Rnf9UMGMQ1 to help complete beginners use these plugins in #cellprofiler! #imageanalysis
Straight on the back of the excellent talks at #LABIxBINA2023 Beth Cimini stars in #TheMicroscopists (@broadinstitute) and discusses the challenges of developing popular software tools like #CellProfiler in academia and why harsh peer reviewing is your friend and leads to better user-friendly software. Plus - why someone on X (formerly Twitter) got mad when Beth shared a picture of pasta.
See/Hear: https://t.co/8MtnWYsMVx
#DataScience #Microscopy
Full house for @CiminiLab’s keynote @Bioconductor talk this morning!
#BioC2023 #images #CellProfiler #DataScience
Why didn’t-I use Cell Profiler (https://t.co/pQnrqOimIc) before?? The app works great for counting nuclei, colocalization etc. Really impressed. I used to do the same things in FIJI, but this is much faster!
#CellProfiler #Microscopy #Imaging #Morphometry
Great job Sander Derwig! Your first animation of a nucleus passing through a confiment. Sander is a biomedical engineering master student in our lab and his aim is to extract dynamic data from still images. @TUeindhoven @shantanuXsingh #TopoChip #CellProfiler
Working on an image analysis pipeline with #CellProfiler while reading about the Abstract Expressionism exhibition at the Whitechapel and my worlds are literally colliding.
Different strokes: the forgotten women of abstract expressionism https://t.co/BAxXwMcJ3c
Woah.
My #CellProfiler pipeline taking some inspiration from Piet Mondrian this morning. #ScienceTwitter #Microscopy
Love images? Nice opportunity to work on bio image analysis & explore #CellProfiler, just apply 👇
We're hiring for our Postdoctoral Training Program in #BioimageAnalysis! Are you a wet lab biologist who wants to move into computational tools and workflows? Do you love collaborating with others & solving puzzles? Do you want a career-specific training program?
@AnhHLe2702 @haesleinhuepf Segmenting images in specific software, like choosing a store to buy salt, can depend on factors like price, user experience & overall workflow. If your workflow is built in #cellprofiler, it makes sense to segment your images there, same for other software #imageanalysis
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