Top Tweets for #pbugm
Wish you could detect and quantitate DNA damage and modifications on a genome-wide scale? @NEBiolabs has a tool for that! Learn all about the RADAR-seq method in this #PBUGM talk by Kelly Zatopek. https://t.co/0QNLHcX870
Chances are, if you've analyzed PacBio #IsoSeq data, you've used one of @anaconesa's tools. The power user/developer extraordinaire gave us a peek into her pipeline. Check out the video!
https://t.co/1ICL9GtFw9
...and our blog for more #PBUGM highlights
https://t.co/4FBFefE90C
Cos we just can't get enough of those #bears! Today's video of the day involves @trojahn_shawn & his ursine friends at @WSUPullman
https://t.co/6bLAqm7cp5
For more #PBUGM highlights, check out our blog.
https://t.co/3hhMGh8KvE
Video of the day: "Getting a read on one little worm with PacBioโs low DNA input workflow & the @Agilent Femto Pulse System," by Erin Bernberg from @UD_DNAcore. https://t.co/JQotuPrpct
For more #PBUGM highlights, check out our blog.
https://t.co/yW2P2Plbv6
As if you were there... if you missed our North American #PBUGM at @UD_DNAcore, check out this comprehensive overview on our blog. Sequel II System, #HiFiReads, #IsoSeq, low-input, clinical genomics, microbes & more. Next up: Videos! Stay tuned...
https://t.co/CgvCDfq7dw
Thanks Pacbio and Eve for organising an interesting and fun meeting and giving me the opportunity to share my work to a friendly community of scientist!
@EarlhamInst @EI_single_cell #PBUGM
Links to VGP & mitoVGP pipelines on GitHub:
https://t.co/xfyYZeKHCU
https://t.co/UMszYoI5lw #PBUGM @genomeark
https://t.co/6q5d6y2dKR
GF: Highlighting MitoVGP: even small mitochondrial genomes which we consider complete have very repetitive elements which are missed @giulio_formenti @RockefellerUniv @genomeark @PacBio #PBUGM
.@giulio_formenti : "mitoVGP" pipeline to rescue and assemble mitochondria from VGP data. mtDNA reads are in raw data can be fished out by map to ref (isn't this biased towards genomes w a ref?) https://t.co/cXLK05acff . #PBUGM @PacBio
.@giulio_formenti : panhuman genome project to sequence 350 WGS to capture racial & ethnic diversity. apply trio binning on human. script to generate k-mer histogram by haplotype; https://t.co/PlIZZaukF0 . #PBUGM
Now @giulio_formenti discusses the plan to use trio binning to generate a Human Pangenome reference. More about this initiative: https://t.co/EyjtgdtXDz #PBUGM
.@giulio_formenti: VGP assembly combines pacbio 10X bionano HiC. current progress >100 species assembled. make use of trio binning when possible. assembly pipeline here: https://t.co/0tIDoHXmSO . #PBUGM
Now @giulio_formenti discussing the vaquita, sadly only 20 of these porpoises remain. Read more about this threatened species and others on our blog:
https://t.co/TgYFfpG6Zp #conservationgenomics #PBUGM @genomeark
Giulio Formenti about the Vertebrate Genome Project: why long reads matter @giulio_formenti @RockefellerUniv @genomeark #PBUGM
Great merchandising :) pacbio socks as bright led light dimmer. #PBUGM
.@giulio_formenti : vaquita on the brink of extinction. genome sequencing can help increase gene pool diversity for conservation. #PBUGM https://t.co/pZ2jl3FghK
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