rollin

[@inextvir @inextvir]

Congratulation to @NuriaFontde for her paper!
First report of several apple viruses in Belgium.
https://t.co/KLPnHJVmd6
@Be_Phytopath @agroscope @AgroBioTech

[Temple Coline @ColineTemple]

Very excited to share my first first-author paper!
And I was not alone... 🤝🎉🤝🎉
Thanks to all the co-authors for this very nice international collaboration!

@Be_Phytopath @KrisDeJonghe2 @HeikoZiebell @ViromeHunter @DenisKutnjak & all

https://t.co/fzTXllmIhx

[Svetlana Ugarčina Perović @svetlana_up]

"shotgun and 16S metagenomics data"

16S metagenomics is a misnomer – a wrong or inaccurate use of a name or term

TL;DR 16S rRNA gene sequencing is NOT metagenomics

Well if you are still in doubt, you should read the thread below.
1/5

[rollin @johan_rollin]

Une pensée pour les bionformaticien-ne qui ont un mois pour mettre à jour les interfaces web de leur outil.
https://t.co/DMxI38pg4N

[LABGeM @genolabgem.bsky.social @GenoLabgem]

Big day for @axbazin ! #PhDlife #pangenome #proudPI

[jonny saunders @json_dirs]

More fun publisher surveillance:
Elsevier embeds a hash in the PDF metadata that is *unique for each time a PDF is downloaded*, this is a diff between metadata from two of the same paper. Combined with access timestamps, they can uniquely identify the source of any shared PDFs.

[@inextvir @inextvir]

#rvv2021 Nuria is presenting her work on virome characterization of pome fruit, come at poster 21.
@NuriaFontde

[@inextvir @inextvir]

#RVV2021 the plant virology meeting just started in Aussois, with 5 ESRs, the largest INEXTVIR students gathering so far? @ColineTemple @MaryamKhalili62 @deborah_s92 @NuriaFontde @johan_rollin
know more here: https://t.co/XOYzIG9QP6

[LABGeM @genolabgem.bsky.social @GenoLabgem]

Poster #115 #JOBIM2021

[@inextvir @inextvir]

@johan_rollin presented Cont-ID, a tool for the detection of cross-contamination in viral metagenomic data at @jobim_2021 with a lot of interesting discussions. Looking forward to the next poster session tomorrow. 👇👇👇

[LABGeM @genolabgem.bsky.social @GenoLabgem]

Come look at LABGeM job offers on Gather Town #JOBIM2021

[rollin @johan_rollin]

@ViromeHunter Not sure, I didn't benchmark it😅. I just know that they use tblastX by default in the lab

[Mick W@tson ↙️ @BioMickWatson]

Bioinformatics over the years:

1990s: doing a BLAST search
2000s: analysing 30 microarrays
2010s: nalysing 6Tb of NGS
2020s: creating a cloud the size of Netflix to reanalyse the whole of SRA for one figure

[Galaxy Project @galaxyproject]

Looking for work? Know someone who is? The Galaxy Community has openings in Europe and North America https://t.co/wCUcT5c4Hn #USeGalaxy @CCLRI @IFB_Bioinfo @PSB_VIB @useAnVIL @JohnsHopkins @UniNMBU @INRAE_MICALIS @Roche @ELIXIRnodeBE @GalaxyProject

[Kai Blin @kaiblin]

Writing the upteenth version of "we used to find new natural products by screening and isolating, but now genome mining is the hot thing" for a paper intro. I wonder how long I can keep doing that before I self-plagiarise because I run out of words to say this with.

[Galaxy Project @galaxyproject]

Galaxy EU has surpassed 20000 users!
5 continents, 100 countries, more than 100 industry companies, 4000 users trained using TIaaS, 11 million jobs, 12 jobs per minute...

Thank you @denbiOffice @ELIXIREurope @EoscLife @UniFreiburg
THANK YOU, Galaxy community!!

[Oded Rechavi @OdedRechavi]

Every bioinformatic pipeline

[Adelme Bazin @axbazin]

Happy to be presenting panRGP, a pangenome-based method to predict genomic islands among thousands of microbial genomes of the same species, this morning at @ECCB2020 in the genome track !

[@inextvir @inextvir]

@gregoruar @HiriDaoud @escs2020 @eccb2020 You can ask us question now at @escs2020, We present the poster 63: https://t.co/jIZHG5RKGL