Jon Lundstrøm

PhDing my way through glycans, synthetic biology, & machine learning @goteborgsuni
Occasionally to be found on a mountain top somewhere.

[Beilstein-Institut @beilstein-institut.bsky.social @BeilsteinInst]

Daniel Bojar and co-researchers report the discovery and characterization of Cucumis melo agglutinin (CMA1), a new R-type #lectin from melon 🍈🍉.
🔗 https://t.co/HAyrQSqmI7

#carbohydrate #GlycanArray #PlantLectin #BJOC 💎🔓 @daniel_bojar @jonlundstrm

[Daniel Bojar @daniel_bojar]

Meet CandyCrunch, our AI-glycomics model featured in @naturemethods! Trained on 500k spectra for rapid glycomics analysis on all glycan types.
@ElisaTelisa, @CallumMIves, @karlsson_niclas, @_jurban
More data=better models, so keep on uploading! #glycotime
https://t.co/2BnoGEZW65

[Daniel Bojar @daniel_bojar]

Compositional data analysis for comparative glycomics! Learn why you can't live without it:-)#glycotime
glycowork v1.3 tackles glycan abundance interdependence +uncertain absolute amounts via CLR/ALR transformations&scale models, yielding reliable findings
https://t.co/0IlTEJoXA3

[Daniel Bojar @daniel_bojar]

🎉 glycowork v1.2! #glycotime
- A (very) basic GUI for Windows in early alpha (on the Release page). 🖥️
- New analysis functions for alpha diversity & biosynthesis. 🔍
- Smoother experience with automated outlier handling & more efficient graph ops. ✨
https://t.co/ViE100aueC

[Jon Lundstrøm @jonlundstrm]

Our mini-review outlining recent trends in milk oligosaccharide research is now live at Carbohydrate Research - have a look! 🥛

#glycotime #MOs

https://t.co/KiihUXKWec

[Jon Lundstrøm @jonlundstrm]

@AnneImberty @BeilsteinInst Thank you Anne!

[Jon Lundstrøm @jonlundstrm]

The full CMA1 story is now also online at @BeilsteinInst Journal of Organic Chemistry! #glycotime #lectin

https://t.co/zeVl0uQkom

[Jon Lundstrøm @jonlundstrm]

With our latest preprint, we're diving into the complex world of plant glycan-binding proteins - identifying and characterizing a novel R-type lectin from melon, Cucumis melo agglutinin / CMA1. #glycotime

https://t.co/GIxlBot3Ne

[Jon Lundstrøm @jonlundstrm]

@AdrianoAguzzi I’ve used miltenyi biotec’s cytokine secretion assays to sort Th1/2/17 cells - worked really well!

[GlyGen @gly_gen]

In this month’s #GlyGenWebinarSeries, Daniel Bojar presented powerful tools and strategies for discovering critical elements hiding in glycomics data: https://t.co/rIe56J2X10. Visit his ‘glycowork’ hub for more details: https://t.co/OWSFwqWVrM

[Jon Lundstrøm @jonlundstrm]

... and I'm extremely proud to have been selected to receive the Young Scientist Bosses Award 🏆🥳

[Jon Lundstrøm @jonlundstrm]

I had a blast presenting our recent #glycotime work at the 26th Nordic Glycobiology Meeting hosted by @cphglyco last Friday! 🥛🧑‍🔬 ...

[Daniel Bojar @daniel_bojar]

We're hiring! Join us for your PhD; the goal is for you to be hybrid, so we ❤️ either computational or experimental background
Glycobiology, systems biology, AI, bioinformatics --> have it all 👩‍💻🧑‍🔬
#glycotime
https://t.co/fHfuNf3afp

[Daniel Bojar @daniel_bojar]

After 2.5 years of development, glycowork releases its version 1.0 🥳🎊
🌟it, use it, add to it.
Countless small improvements in this update, but I want to talk about two *big* changes: universal input & native, narrow wildcards 🥁
#glycotime
https://t.co/ViE100aueC

[Daniel Bojar @daniel_bojar]

Excited to share our newest preprint! CMA1 as one of the first deeply characterized melon lectins with a neat binding specificity: C2-substituted galactose (GalNAc / Fuca1-2Gal), including in GAGs (CSA / CSC) #glycotime
https://t.co/QQsEp5h9Ro

[Jon Lundstrøm @jonlundstrm]

I'm grateful for the support from COST action STSMs @InnoglyA @NanoProbes and all the collaborative efforts making this work possible!

[Jon Lundstrøm @jonlundstrm]

With our latest preprint, we're diving into the complex world of plant glycan-binding proteins - identifying and characterizing a novel R-type lectin from melon, Cucumis melo agglutinin / CMA1. #glycotime

https://t.co/GIxlBot3Ne

[Jon Lundstrøm @jonlundstrm]

Supporting our findings on a molecular level, we also solve the high-resolution structure of the CMA1 N-terminal domain in complex with sugar ligands using X-ray crystallography.

[Jon Lundstrøm @jonlundstrm]

Proud to have our recent work on milk oligosaccharides featured on the cover of Molecular & Cellular Proteomics! @molcellprot #glycotime #MO
https://t.co/q7l6cdYjyP

[Jon Lundstrøm @jonlundstrm]

Our latest work on differential expression analysis of glycomics data is now live at @CellRepMethods!
https://t.co/VRnICsoGIQ

[Jon Lundstrøm @jonlundstrm]

With glycowork v0.8 we're introducing functionality for differential expression analysis of glycan structures & motifs - have a look and let us know what you think! #glycotime