Associate Professor at University of Oslo. Interested in bioinformatics, 3D Genome, epigenetics, genomics and gene regulation. Postdoc positions available.
Struggling with Hi-C data? Meet hictk: a new toolkit revolutionizing working with .hic and .cool files! Seamless interoperability for a range of file formats, and blazing-fast performance, 3D genomics has just gotten a lot easier. Developer: @robomics https://t.co/IPD8PctISc
🚨 PhD in Bioinformatics & Gene Regulation 🚨
Join the Bioinformatics in Life Science initiative through a multidisciplinary project to unravel gene regulation from DNA to proteins, co-supervised by @eviledv@jonnings and me @biovitenskap @NCMMnews!
https://t.co/q3bZfWuDel
Finally biologists can also use numpy (array programming). Handling e.g. DNA and protein sequences with convenience and speed, like physicists and machine learners for decades have worked with numerical data: https://t.co/06MjAmBINx (1/3)
Epigenetics, gene transcription and cancer research X afficionados...Don't forget to register and join our exciting "nuclear topology and 3D chromatin architecture in cancer" online symposium taking place on Monday November 11th! Organized by @jane_skok and @LabMelnick #epigenetics #cancer @NYUGSOM_Path
🎉 Excited to share the peer-reviewed version of our manuscript describing COBIND, a tool for revealing TF co-binding patterns using non-negative matrix factorization. Great work led by @IevaRau @NCMMnews @NordicEMBL@UniOslo_MED@UniOslo
https://t.co/XqUqTDWWdk
@NAR_Open
Our lab (https://t.co/Hmq8OJZ4ov) is still looking for a PhD candidate with a strong computational biology background and a keen interest for genome assembly and #3Dgenomics to join our subproject in the exciting EvoREST initiative on genome evolution. @yourUMG@uniGoettingen
Last couple of days to apply for this postdoc position to generate deep learning models and expand the great JASPAR and UniBind databases @NCMMnews!
It's a fantastic project in a very supportive group with outstanding collaborators!
Congratulations to Eivind Hovig! And thanks for great collaboration through more than two decades! You have made invaluable contributions to FUGE, @elixirnorway and Norwegian bioinformatics and cancer research!
Associate professor of Medicine (Biochemistry) position open at Institute of Basic Medical Sciences, University of Oslo!
We are recruiting a new colleague working within the fields of chromatin biology or membrane dynamics!
@UniOslo_MED@WAutophagy
https://t.co/Sbcd5F4zyL
We're excited to share our manuscript describing COBIND, a novel tool for the identification of transcription factor co-binding patterns with non-negative matrix factorization
https://t.co/uGLl8Maqix
1/9
MoDLE, modeling of DNA loop extrusion, from @robomics, @jonnings, simulates DNA contact maps quickly, using low memory. It requires a genome region and the barrier positions in the region eg CTCF binding sites. Predicts effects of deletoins on TADS https://t.co/mYtd52KIum
New publication: "MoDLE: high-performance stochastic modeling of DNA loop extrusion interactions" with Roberto Rossini and Jonas Paulsen @biovitenskap. @jonnings@robomics@GenomeBiology
https://t.co/RYqHHCVn7v