Kaster Lab

Hunters of microbial dark matter @kitkarlsruhe using meta- and single-cell ‘omics.

[Kaster Lab @kasterlab]

We are happy to have contributed with a chapter in the book Advances in Applied Microbiology, available at @sciencedirect. It discusses the past and current approaches of single-cell transcriptomics and data analysis in prokaryotes and future challenges.

https://t.co/RJ2zgmmzlH

[Kaster Lab @kasterlab]

Our new publication at @MDPIOpenAccess addresses the identification of antibiotic resistance gene hosts in a high-throughput and cultivation-independent approach. Check it out!

https://t.co/EgTtl1ReHV

[Kaster Lab @kasterlab]

Our new publication, released on @IJMS_MDPI, improves Multiple Displacement Amplification for Microbial Single-Cell genomics via volume reduction. It significantly reduces costs while improving genome coverage. You can access it here: https://t.co/zTCI3eIJ5X #mdpiijms

[Kaster Lab @kasterlab]

Out in @FEMSmicro is our new publication, which elucidates the functional roles of prokaryotic proteins using big data and artificial intelligence. Check it out! 💻 🧬
https://t.co/JbrST69DDx

[Kaster Lab @kasterlab]

Our former PhD student @MorganMicro was awarded the NASA Postdoctoral Proposal Fellowship! We are very proud of her achievements and wish great success in her ascending career! ✨🚀🧪 #WomenInScience

[Kaster Lab @kasterlab]

Check out our new method for combining single cell genomics with metagenomics: Midi-metagenomics. Feel free to add your thoughts and suggestions in the comment section! https://t.co/m9WaMdTvWM

[Kaster Lab @kasterlab]

And in those celebration times e wish all the best for our new PhD, Dr. Morgan Sobol @MorganMicro! 🎉 🥳 🎓 Your teachings and kindness will be missed in our lab.

[Kersten Rabe @RabeKersten]

Enriching not yet cultured microorganisms from diverse habitats using Silikone foams. Check out the press release and our corresponding paper in the link 🦠🧬🧫

[Kaster Lab @kasterlab]

Big congratulations to the new Dr. Hao-Yu Lo! We wish you the best and brightest future!

[Kersten Rabe @RabeKersten]

Enriching species of Microbial Dark Matter from water-based environments but also from air?
Our solution: Macroporous Silicone Chips: https://t.co/6PxpNoVyNs
with @kasterlab @NiemeyerLab as part of the @The_MicroMatrix project.

[VAAM - Vereinigung f. Allg. u. Ang. Mikrobiologie @VAAM_Microbes]

Hands-on workshop single-cell genomics & bioinformatics - still places available!
Application for the workshop @kasterlab @KITKarlsruhe from 21-25.11.22 is open until📅 Nov 1st
Registration & info👉 https://t.co/QUVmkHb7V7
Please RT!

[Kaster Lab @kasterlab]

🚨Looking to gain hands-on experience in microbial single cell genomics wet-lab and bioinformatics methods? Then please consider applying to our workshop being held Nov. 21-25, 2022 in Karlsruhe, Germany. Application deadline is Nov. 1! 👉https://t.co/IKBHIdFnoj @VAAM_Microbes

[Kaster Lab @kasterlab]

Our collab with @NiemeyerLab @RabeKersten is now live on @biorxivpreprint 👇 check it out!

[Kersten Rabe @RabeKersten]

New paper on preprint - now submission. Novel stress senor offering interesting insights into diverse cellular stress reponses 🦠🧪🧐🤓Great work spearheaded by Ahmed Zoheir.
If someone is interested in the plasmids, get in contact, we like others to use them.

[Kaster Lab @kasterlab]

If you love to script, are curious in deciphering complex microbial communities and their individual properties, please submit your application to [email protected]. Also check out our page for more info about our group at https://t.co/buHQW08KNf Thx!!

[Kaster Lab @kasterlab]

‼️ We’re seeking a highly motivated PostDoc for bioinformatic data analyses and pipeline development. Your research will be focused on analyzing metagenomic data from complex microbial communities, as well as single cells. 1/2

[Kaster Lab @kasterlab]

@RastegarS1 Thanks!

[Kaster Lab @kasterlab]

Our genome assessment pipeline for microbial dark matter, MDMcleaner, is now available via Pip & Conda! Also check out the corresponding publication at NAR: https://t.co/8lqdLnNQfD

[Kaster Lab @kasterlab]

Finally got everyone together for a new group photo 🥳

[wilmeslab @wilmeslab]

Day 3⃣ of #EMBOmicrobial with Anne-Kristin Kaster, John Vollmers, and Florian Lenk from @kasterlab presenting on Single-Cell Omics, thereby further complementing the multi-omics 🧰 to study 🦠 communities

[Christian Jogler @ChristianJogler]

Looking for a postdoc keen on cultivating and characterizing #Planctomycetes @UniJena @microverse_exc with interest in reactor development and small molecules: https://t.co/gxUt335TUJ)