Excited to share our newest #preprint: Multidimensional proteomics identifies molecular trajectories of cellular aging and rejuvenation.
A great project with the @juditvr @DunhamLab @mkaeberlein teams!
📄Read: https://t.co/i78BXLFrdL
💾Explore: https://t.co/ZVlUGMAVnn
1/9
Feeling pretty psyched to see a major work from my postdoc now published, this time in @embojournal
We examine the fitness cost of spurious phosphorylation, with major additions over the 2023 preprint: https://t.co/354VPJWLTC
My tweetorial is below (1/n)
The #SignallingAlliance seminar series continues today at 3pk UK, 4pm CET. Today we have talks by @MarioLeutert and @fabfrohlich Free to watch at https://t.co/mlSMDCXWJP
This Thursday! Note the slight change of plans with Mario Leutert representing the @juditvr group.Looking forward to two exciting #SignallingAlliance talks!
#IBFG_External_Seminar | Join us on January 19th for a seminar entitled "Deciphering Regulatory Protein
Networks in Aging and Stress Signaling" by @MarioLeutert, a researcher from @IMSB_ETH.
🔑Free Access
⌚️12.30 pm
📍 IBFG Conference Room
More info👇
Excited to share our work on high-dimensional #phosphoproteomics in yeast exposed to >100 environmental and chemical perturbations. This is one of the largest and most systematic perturbation-phosphorylation resources for any species. #TeamMassSpec (1/8)
There are a number of open questions in cell signalling that require a systems level view. Our Signalling Alliance webinar series will pair experimental and computational groups exploring these questions. Join us online.
We are happy to present our workflow DQGlyco enabling the in-depth quantification of glycoproteome dynamics. In total, we characterize > 150,000 glycoforms in the mouse brain. https://t.co/hRDnvzORkS
Out now in @eLife: We explore how genetics and environment rewire muscle insulin signalling
Featured here: https://t.co/s9rTrI9AMU
Available here: https://t.co/i1Avv6tbtG
A thread
How many different protein shapes are there in 200 million predicted AlphaFold structures? In a joint project with @thesteinegger we (@ibarrioh, @jgyyy15
et al) clustered these into around 2 million groups to study their novelty and evolution https://t.co/e2lMGt3Dvw
I am truly excited to share one of the major works to emerge from my postdoc, now on bioRxiv:
https://t.co/Y2YHSCM7Rx
We explore the role of differential 'substrate quality' on the phosphorylation of kinase targets, using as our case study the master kinase CK2 (1/n).
We are looking for a #PhD candidate! Are you interested in #chromatin and want to combine high-throughput methods & molecular biology to understand how histone #PTMs regulate chromatin functions using #yeast? 👩🔬🧑🔬🧫🧬 Contact us 👇Please spread the word!
Here's what happens when you start working with a postdoc & scientist too cheap to buy reagents: @MarioLeutert@RRodriguezMias
Checkout our automated and cost effective phosphotyrosine enrichment protocol now in JPR!
@juditvr Villen Lab, UW
https://t.co/ELOeavbuTq
Our Yeast 5k Proteome Project is now published in Cell.
We measured proteome profiles for almost 5,000 single knock-out yeast strains. We show what drives protein changes and how this resource can be used for functional annotation of genes and proteins.
https://t.co/TPC8qQqu7a
Do you want to see how #AlphaFold2 can be applied to study protein-protein interactions? Join us for a new #FGCZseminar where @pedrobeltrao will show its potential and limitations.
April 25th, 16:00-17:00
Registration required
Apero will follow
#proteomics, #interactionproteomics
This was an amazing team effort between the labs of @juditvr , @DunhamLab , @mkaeberlein with contributions from Joe Armstrong, @AnjaOllodart , Kyle Hess, Michael Muir and @RRodriguezMias . 9/9
Excited to share our newest #preprint: Multidimensional proteomics identifies molecular trajectories of cellular aging and rejuvenation.
A great project with the @juditvr @DunhamLab @mkaeberlein teams!
📄Read: https://t.co/i78BXLFrdL
💾Explore: https://t.co/ZVlUGMAVnn
1/9
We show numerous examples of age-affected processes in our study and anticipate that our resource will be useful for studying the basic biology of aging. Explore how the properties of your favorite protein are impacted by age here: https://t.co/I0ivnvjXMu 8/9