Metrichor

The Internet of Living Things

[Metrichor @metrichor]

@zerojinx @nanopore @DrCuff First customer use was a year earlier than that, in 2013, in a basement lab in Boston for an invitation-only special event during ASHG

[Oxford Nanopore @nanopore]

We've just updated our EPI2ME and MinKNOW #SARSCoV2 analysis workflows to improve our support for #Omicron variant detection. Find out more in this Community post (login required):https://t.co/ypJu6XKHw7

[Edgar Sevilla @EdgarSevillaR]

Happily getting our @nanopore #sequencing analyzed in #Epi2me

[Metrichor @metrichor]

This week in 2015, EPI2ME debuted at WIRED Health with an equine health example

[Metrichor @metrichor]

Freshly published: v0.1.4 of our StencilJS web component library for Nextclade phylogenetics visualisation, used as part of our ARTIC/Nextclade workflow for COVID19. You can find it at https://t.co/OxOE0ygP0O

[Metrichor @metrichor]

@kejames @nanopore Hi Karen. With Rosetta2 there shouldn’t be any issues with EPI2ME but we’re still rolling out M1 across our dev & test systems for native builds & support. Working on official documentation

[Metrichor @metrichor]

Seven years ago this week, the first EPI2ME runs happened, on-prem, in our lab in Boston, for 50 invited guests performing their first Nanopore sequencing experiments

[Metrichor @metrichor]

NEW @metrichor #epi2me Desktop Agent v3.1.3
Run *MULTIPLE ANALYSES* at the same time!
Read about other exciting features in our @nanopore community pages https://t.co/1ujhPy5fY7

[SJCS Cambridge @SJCS_Cambridge]

Mr van Ginkel introduced nano technology to 2V & looked at DNA & how we can sequence this using the nano technology. 2V extracted DNA from strawberries & made a simple centrifuge to extract micro organisms from the soil.
@nanopre @metrichore @glenveegee #nanotechnology #DNA

[Metrichor @metrichor]

Our very own @glenveegee showcasing @nanopore and inspiring the next generation at @NewHallSchool this evening

[Metrichor @metrichor]

@ReindertN Apologies for the delays to analyses. We’ve been experiencing some capacity scaling-responsiveness problems in Europe today due to high demand but we do expect things to settle shortly

[Metrichor @metrichor]

@laura_boykin Always happy to talk. Many of the most popular EPI2ME tools are not for Human

[Metrichor @metrichor]

Did you know, you can install both epi2me-cli and epi2me-agent using Homebrew on MacOSX! "brew tap nanoporetech/tap" — more info at https://t.co/1FMPIHFONa

[Metrichor @metrichor]

Our favourite feature in the 2019.7 Agent & CLI releases is that your uploaded files are no longer moved around during the course of a run! The apps keep a little local sqlite3 database to track upload progress.

[Metrichor @metrichor]

The team is pleased to announce the 2019.7 releases of both EPI2ME Agent and EPI2ME CLI. Find them both at the downloads page https://t.co/iVENqBfgmV and more info at https://t.co/2cDfrPypuG

[Justin O'Grady @Justin_OGrady]

Got first @nanopore Flongle flowcells since late 2018 - gave them a try using our respiratory metagenomics pipeline https://t.co/Aa4OZR2LGI. >70k reads (200Mb) in 2hr. K. oxytoca was top hit - the pathogen reported by clin micro lab. Flongle looking good for clin metagenomics!

[Mari Miyamoto @marimiya_tky]

This is a taiyaki, and this is our taiyaki, https://t.co/ClB7PLw3OS

[Metrichor @metrichor]

@Psy_Fer_ @pathogenomenick @rrwick Not an exposed parameter in EPI2ME yet, but yes. Come and see @philres1 on the EPI2ME stand :)

[Metrichor @metrichor]

@pathogenomenick @Psy_Fer_ @rrwick Nothing against porechop Nick - qcat is the demuxer used in EPI2ME. We thought the community might like to have it as well :)

[Metrichor @metrichor]

@CallumJCParr Hi Callum. One of the analysis components is likely to have balked at the file size here. EPI2ME real time works much better with batches of smaller files if you can give that a go. The team are aware of the issue and it's a priority to fix.