Mitro Miihkinen

Computational Systems Biomedicine researcher at FIMM

Passionate about data-driven biological discovery and finding treatments for diseases

[Mitro Miihkinen @mitroe]

Proper cell type annotation of #ST #SpatialTranscriptomics samples brings out even the most sophisticated tissue architectures of any tissue. Check out our latest open-source tools for this, now out in Bioinformatics: https://t.co/2fYsh424ui

[Mitro Miihkinen @mitroe]

🚀 I’m on Bluesky! 🌌
If you’re into single-cell biology, bioinformatics, cancer or drug development, let’s connect! 🔬✨
Follow me here: https://t.co/2bJm6QJIUb

#Bluesky #ScienceTwitter #SingleCell #Bioinformatics

[Mitro Miihkinen @mitroe]

16 funded PhD positions in metastasis research

https://t.co/3EkWpZ6thx

[Mitro Miihkinen @mitroe]

@MAG2ART Beautiful! What's the mitochondrion dye here? Asking for a friend😄

[Oliver Stegle @OliverStegle]

Job alert! Joint us in Heidelberg to develop and apply computational methods to dissect molecular variation in CRC cancer. #Postdoc #SpatialOmics #MultiOmics #AI
Apply here: https://t.co/IM3EsyInOh

[Razvan Borza @rborza_]

🚨 Great alternatives to BioRender are now available!!

📢 @NIAIDNews offers a collection of public figures and icons for everyone to use. Check it out at https://t.co/cZFQAf5nTz

[Itai Yanai @ItaiYanai]

If you think the next big idea in your field will come from inside the field, you're probably wrong.

[Oded Rechavi @OdedRechavi]

Signing a PDF

[FIMM HelsinkiUni @FIMM_UH]

Join FIMM as a MSCA Doctoral Researcher, to work in the field of multiplexed immunofluorescence profiling of cancer metastases. This fully funded 4-year position in Teijo Pellinen's team is part of the #Mac4Me network.
Apply by Nov 22 👇
https://t.co/PmH0TIyCmR
#sciencejobs

[Mitro Miihkinen @mitroe]

A fully-funded PhD position around cancer-immune crosstalk and improving immunotherapies with data-driven multi-modal approaches. https://t.co/S5BYo46ptU

[Science Immunology @SciImmunology]

A new study in Science #Immunology highlights how LIPSTIC, a proximity-based labeling method, can identify antigen-presenting #DendriticCells that activate #CD4+ TCells in the tumor and tumor-draining lymph nodes in mice. https://t.co/y1rqq6hYln @ChudnovskiyLab @victora_lab

[Milica Radisic @milicaruoft]

In case you are looking for an interesting/easy reading this weekend, how about some thoughts on in vitro human cell-based models https://t.co/okYvj3QWGP @CellPressNews @TheLutolfLab @TakebeLab

[Mitro Miihkinen @mitroe]

Fantastic work from our group: Single-cell profiling of patient tumours can inform effective and safe therapies https://t.co/BQFwBIOnhS

[FIMM HelsinkiUni @FIMM_UH]

scTherapy, a novel machine learning approach from Tero Aittokallio and colleagues, leverages single-cell transcriptomic profiles to identify multi-targeting treatment options for individual patients with hematological cancers or solid tumors. https://t.co/pnfca8Bt3c

[Colinda Scheele @ColindaScheele]

👇🔬🧫Exciting story about human breast composition and 3D architecture in @CellReports: https://t.co/1tQXdObOOy👇Led by @oonakaroliina and Markus Peurla (@EPeuhu lab @BioscienceTurku ) with help of @kamyab_saberi and @larissamourao_ @vib_ccb @Onco_KULeuven

[Oliver Stegle @OliverStegle]

Excited about multi-omics in health? We have a fully-funded PhD position on AI for multi-omics analytics as part of HIDDS4Health call 2024. Apply here: https://t.co/QRuvw3lYhQ

[FIMM HelsinkiUni @FIMM_UH]

Researchers at FIMM have developed an effective computational platform that automatically identifies cell types from #SpatialTranscriptomics data. The method holds great potential for understanding tissue organisation in both health and disease.
💻⬇️
https://t.co/lQIGbNbF1v

[Mitro Miihkinen @mitroe]

@KristenMnader's work on spatial transcriptomics analysis now highlighed at the University web pages
https://t.co/faS6EprKGF

[Mitro Miihkinen @mitroe]

@KristenMnader's work on spatial transcriptomics now highlighted at the university web page: https://t.co/faS6EprKGF

[Mitro Miihkinen @mitroe]

@westermarcklab Congrats Jukka, these are much needed efforts!

[Mitro Miihkinen @mitroe]

@GorinGennady @lpachter Good call, did not remember it actually uses diffusion pseudotime to get pseudotime. Is it more robust for this reason? Maybe