Michael Payne

PostDoc in @lanlabUNSW. Microbial genomics, Bioinformatics and Python!

[Michael Payne @mjohnpayne]

Our new method for microbial genomic surveillance and epidemiology, multilevel genome typing (MGT) with the first database for Salmonella Typhimurium. Check out the paper https://t.co/N3RkEDJ0Mq and the new database https://t.co/KlnQL8FLqg. #lanlab #Genomics #microbiology

[Amanda Yun Luo @amandaunsw]

Just published👍I’m glad to share: Genomic evidence of two-staged transmission of the early seventh cholera pandemic | Nature Communications ⁦@LanlabUnsw⁩ #cholera https://t.co/8xWsQpH5Gf

[lanlabUNSW @LanlabUnsw]

New research from our talented PhD student Samitha! Genomic diversity of Salmonella Typhimurium isolates from meat chicken processing plants in NSW, Australia. #genomics #poultry #salmonella https://t.co/6uJzH9SnLM

[bioRxiv @biorxivpreprint]

Characterising Staphylococcus aureus genomic epidemiology with Multilevel Genome Typing. https://t.co/ojf2tkNRgL #bioRxiv

[lanlabUNSW @LanlabUnsw]

New paper from @LanlabUnsw, in @EMI_Journal https://t.co/ImYdwEXLYl. We described the global genomic epidemiology and evolution of B. #pertussis with >6500 isolates using MGT. @mjohnpayne @AliceZhengXu @compbiosan @sophie_octavia Public database -> https://t.co/czK2WACMzr. 1/6

[Xiaomei Zhang 张晓梅 @zxmXiaomei]

Check out our latest work on “Genomic markers of drug resistance in Mycobacterium tuberculosis populations with minority variants”. Thank you ⁦all ⁦@drBenMarais⁩ ⁦@Sydney_ID⁩ https://t.co/muTRWshHi6

[Michael Payne @mjohnpayne]

New preprint from @LanlabUNSW! https://t.co/OilCkIUcDl We describe large and small scale trends in global #Bordetella #pertussis populations using a standardised multilevel genome typing (MGT) nomenclature and public database https://t.co/tlNrWJY1Il @LanlabUnsw #microbialgenomics

[Microbiology Spectrum @JournalSpectrum]

Check out the collaborative work of @lanlabUNSW, Westmead hospital, and Queensland Health about #genomic epidemiology of Australian #Salmonella #Enteritidis using multilevel genome typing #MGT. Topics on #outbreak, #MDR and #plasmid. https://t.co/vBlpKCdmR9

[Amanda Yun Luo @amandaunsw]

My latest research on Genomic Epidemiology of Vibrio cholerae O139 is published on Emerging Infectious Diseases journal. Thank you ⁦@LanlabUnsw⁩ ⁦@mjohnpayne⁩ ⁦@DazhiJin⁩ ⁦@UNSWBABS⁩ #cholera is my favorite forever 😄 https://t.co/KmhhfKVbAY

[Michael Payne @mjohnpayne]

@amandaunsw @AUSSOCMIC @LanlabUnsw @compbiosan @AliceZhengXu Haha sorry @amandaunsw!

[Michael Payne @mjohnpayne]

Thank you to @AUSSOCMIC for the ECR poster prize at #2022ASM. What a great meeting! Looking forward to next year! Congrats also to all the other members of @LanlabUnsw who contributed. @compbiosan, @AliceZhengXu, Dalong Hu and Ruiting Lan!

[Michael Payne @mjohnpayne]

Come have a chat tonight at poster 112 at #2022ASM where I am presenting a new genomic nomenclature for Bordetella #pertussis using multilevel genome typing (MGT) developed in @LanlabUnsw. Also check out @compbiosan's poster 147 on our online database: https://t.co/KlnQL8FLqg!

[Ada Lijuan Luo @LijuanAda]

Check my ePoster #209 of #2022ASM about plasmids contributing to the persistent colonisation of Listeria monocytogenes in the food markets @LanlabUnsw.
It is a collaborative project with China CDC, and also an ongoing study of my previous research.

[Daniel Mediati @danmed]

Super excited to share our latest work in the @jaitreeau lab published in @NatureComms detailing how a regulatory mRNA 3’UTR mediates vancomycin tolerance in a clinical vancomycin-intermediate Staph isolate. 🧵 1/3
https://t.co/wBksSGZF0u

[Michael Payne @mjohnpayne]

@emma__harding @GraceJHYan @WhiteLabUNSW @UNSWBABS Congratulations Grace!!

[Laurence Luu @LaurenceLuu]

A summary 🧵of @LanlabUnsw latest Australian Bordetella pertussis genomics paper, just published in Emerging Microbes & Infection.

Paper led by @AliceZhengXu who examined the microevolution of 385 B. pertussis strains across two epidemics from 2007-2018.

https://t.co/8UGIJhdTjo

[Laurence Luu @LaurenceLuu]

Check out the great work from @hirokisuyama1 @LanlabUnsw

His first ever pre-print.

More info about the paper below 👇

[Armella Zadoorian @AZadoorian22]

Followed by another terrific session!

[Armella Zadoorian @AZadoorian22]

Fantastic talks to start the @UNSWBABS Symposium!

[Ada Lijuan Luo @LijuanAda]

I am going to give a seminar talk at University of Technology Sydney about #genomic #epidemiology of #Salmonella Enteritidis using a global database MGTdb @LanlabUnsw

Please join us online on 27th April (this Wed) at 12:30 p.m. AEST. 
zoom link:
https://t.co/DeZRWcMhOX

[Michael Payne @mjohnpayne]

ShigEiFinder version 1.3 released! Includes fixes and updates that resolve issues raised in this excellent recent paper by @iman__yassine and @weill_xavier https://t.co/JFM4Lt9IEV. Accuracy now over 92% in routine surveillance! @LanlabUnsw #Shigella #EIEC. https://t.co/iMgKZK4VrC