omicstool

[omicstool @omicstool]

Explore the R2 RNA Atlas: coding & non-coding RNA expression across 300 human tissues and cell lines.

🔬 https://t.co/0CGsZf5rRX

Great in combination with ENCODE

#Genomics #RNAseq #Bioinformatics

[omicstool @omicstool]

https://t.co/M9hBIhDGnE YY-plot

[R2:Online Genome Analysis & Visualization Platform @r2_platform]

New datascope in R2: https://t.co/JBFYRkbYL2

@NatureComms
Statescope: an integrative deconvolution
framework for discovering cell states in tumors

[R2:Online Genome Analysis & Visualization Platform @r2_platform]

We made an attempt to explain CRISPR screens for non-scientists. a 'CRISPR for dummies', with the help of some AI friends.

1 CRISPR: Precision Editing in a genome https://t.co/CerQyHj4d6

[omicstool @omicstool]

GALNT17 . Who let the dogs out

https://t.co/eLJ8u6ifKv

[omicstool @omicstool]

"Boiling It Down to a Number" — Using Gene Signatures to Score Biological Programmes
https://t.co/bO3kV8yYwI

[omicstool @omicstool]

Explore 999 tumor proteomes from The Pan-Cancer Proteome Atlas (TPCPA) in R2

https://t.co/6luF59o2DF

#proteomics

[R2:Online Genome Analysis & Visualization Platform @r2_platform]

🧬 20 MILLION REQUESTS SERVED! 🚀

We are thrilled to announce that the R2 Genomics Analysis and Visualization Platform has officially crosssed the 20 million request milestone!
https://t.co/XNtufuAlrS

[omicstool @omicstool]

"Seeing the Panel at Once" — Comparing Multiple Genes Across Your Cohort
https://t.co/DZBpc3yb30

[omicstool @omicstool]

"The Clinical Picture" — Using Annotation Analyses to Understand Your Cohort
https://t.co/0X7RCBi5Oi

[omicstool @omicstool]

"It's Not Just About Genes" — Navigating Biological Meaning with the Pathway Finder
https://t.co/TtISZbmKRR

[omicstool @omicstool]

"Boiling It Down to a Number" — Using Gene Signatures to Score Biological Programmes
https://t.co/bO3kV8yYwI

[R2:Online Genome Analysis & Visualization Platform @r2_platform]

Tired of waiting weeks for a bioinformatician?

R2 is a free, browser-based genomics platform for any scientist — survival analyses, differential expression, single-cell & more. No code. No queue.

Cited in 3,192 papers incl. Nature & Cell 🧬

👉 https://t.co/CerQyHj4d6

[R2:Online Genome Analysis & Visualization Platform @r2_platform]

Explore 3.000+ public resources (500.000+ bulk & 5 million+ single dells) instantly in the open online data #science platform https://t.co/XNtufuAlrS . Designed for biomedical researchers.

e.g. GTeX

TCGA, DepMap, Atlasses and many more

[R2:Online Genome Analysis & Visualization Platform @r2_platform]

Interested in #CancerVaccines: R2 has an inventory of NOPs novel open reading frame peptides that form a great start for #neoantigen selection

https://t.co/oXkPpHvblB

[R2:Online Genome Analysis & Visualization Platform @r2_platform]

A Fisher's Exact / chi-square test does not have to be dull. In R2: the open online gata #science platform for researchers ( https://t.co/XNtufuAlrS ), there is a visual fisher test, that presents a graphical interactive representation, which is great for exploratory analysis too

[R2:Online Genome Analysis & Visualization Platform @r2_platform]

Test the genes as a result of your Claude prompt in >500,000 bulk samples with ease in R2: the open online data platform for biomedical research https://t.co/CerQyHj4d6

R2 provides instant access to nearly 3,000 public resources including TCGA, GTeX, DepMap, target, etc.

[omicstool @omicstool]

constitutively activate STAT5, MAPK, and PI3K/AKT signalling; present in ~25% of AML cases, FLT3-ITD confers adverse prognosis and defines a key indication for second-generation TKI therapy in combination with intensive chemotherapy. ⚗️
https://t.co/eLJ8u6ifKv

[omicstool @omicstool]

FLT3 encodes a class III receptor tyrosine kinase governing haematopoietic progenitor survival and differentiation downstream of its ligand FL. Internal tandem duplications within the juxtamembrane domain (FLT3-ITD)...
https://t.co/eLJ8u6ifKv

[r2platform_citations @r2platform_cite]

Easily translate your research question into a great looking figure in the open online R2 #genomics analysis and visualization platform https://t.co/0EXGbN7KFb

Created for biomedical researchers / #PhD students

R2 is also great for #ScienceEducation

3100+ pubmed cites