Rockefeller_Bioinformatics

Bioinformatics Resource Center at The Rockefeller University

[The Fuchs lab @ElaineFuchsLab]

New paper alert! We report in @Cell_Metabolism how serine regulates skin stem cell fate. Congratulations to everyone involved!
https://t.co/5wZEZDmLiP

[Rockefeller University @RockefellerUniv]

Jenelys Ruiz-Ortiz (@jene_ro) is a Bioinformatics Analyst in the Bioinformatics Resource Center, focusing on single cell RNA sequencing data analysis. She works with scientists across the Rockefeller community on bioinformatics data analysis. #HispanicHeritageMonth

[Agata Smogorzewska @MaintainGenome]

Happy to share our paper “Genomic signature of Fanconi anemia DNA repair pathway deficiency in cancer”https://t.co/ZAuHRImWTz.

[Aedin Culhane (@[email protected]) @AedinCulhane]

Very excited to see tools which makes python package easier.. the Bioconductor Packager Herper makes installing conda and python environments simpler. #Bioc2021.

Honored to be chair of the Infrastructure and Programming Short Talk session

[Christopher Cowley, PhD @chris_cowley14]

Excited to share @SamanthaBLarsen and my work published online today in @CellStemCell where we dissect the mechanisms of inflammatory memory establishment, maintenance and recall https://t.co/OZJ44hyXXy

[Rice Lab @RiceLaboratory]

Interested in mosquitoes & RNA biology? Kate Rozen-Gagnon mapped mosquito RNAi networks using CLIP-seq + a new R pkg. The mosquito antiviral machinery is full of surprises! Big thx @virologistjoe @TroelsScheel @Rockefeller_BRC @Twin285. @cellhostmicrobe https://t.co/mS2shptH8l.

[CRUK Cambridge Institute @CRUK_CI]

Registration is now open for our Bioinformatics team’s Functional Genomics Summer School - free for all @CRUKresearch funded researchers!

Topics incl. Experimental Design, NGS data formats, read alignment, Bulk RNAseq analysis, Single Cell RNAseq analysis and ChIPseq analysis 👇

[Wei Wang @Oneway_cafeblue]

Rfastp is available in Bioconductor! Rfastp is an Ultra-Fast All-in-One Fastq Preprocessor writing in C++. Thanks to the whole team. @Rockefeller_BRC https://t.co/a2D7R0zKLQ

[Matt Paul @sciencematt]

We made an R package! For all the folks that love using R and conda, there is now Herper. You can set up, manage and run conda tools from the comfort of R. Thanks to the whole team @Rockefeller_BRC . https://t.co/k687w6zW2S.

[Paula Andrea @orchid00]

I am looking for a new job within a nice team to learn from them and share what I know. About 8 years experience with R, Python, HPC👩🏾‍💻. I can talk to people😆. Open science advocate. Led multiple small projects . Remote work sounds good, or Queensland.

[Levi Waldron @LeviWaldron1]

The Single Cell Multimodal journal club will have an open discussion on "Eleven grand challenges in single-cell data science" (2020) tmrw June 29 at 8am EDT/2pm CET, see https://t.co/WVDcYW8X6B. thanks to new Twitter member @kelly_thinks for organizing!

[Rock Lab 🧬🧫 @RockLabTB]

Hello TB Twitterverse. My lab is looking to hire a staff scientist for Mtb work @RockefellerUniv. Here is the link to the job posting 🦠 🧫

https://t.co/mp1TZTudGF

Please RT and share with anyone interested. #tuberculosis #TBresearch #crispr #microbiology

[Bioconductor @Bioconductor]

Bioc2020 Registration Now Open! The committee is also accepting calls for abstracts for posters/workshops/talks. More information can be found https://t.co/mtlhk2sQZh

[Christopher Cowley, PhD @chris_cowley14]

Check out @samanthaBlarsen and my latest review from the Fuchs Lab! We review how epithelial cells at barrier surfaces mediate immunity following environmental exposures and how they learn from these exposures. Epithelial cells: liaisons of immunity.
https://t.co/qN71cTOUcZ

[Samantha Larsen, PhD @SamanthaBLarsen]

Happy to share our review @chris_cowley14 on how epithelial cells adapt to and learn from environmental exposures! Epithelial cells: liaisons of immunity https://t.co/EUC3FOZaOe

[Liling Wan @LilingWanLab]

excited to see our paper @nature today! We showed how gain-of-function mutations in chromatin reader ENL work to drive Wilms tumor. Fantastic collaborations with many great colleagues in Allis Wen @TjianDarzacq Roeder @Muirlab @KentsisResearch Li labs!
https://t.co/Y2UuLHDiFz

[Vlad Seitan @vladseitan]

Excited to announce our manuscript is now live on @biorxivpreprint Many thanks to everyone involved Brooke Wilson, Lena Boehme, Ambra Annibali, @alanjhodgkinson @rjoakey2012 at @KCLBMBioscience , Tom Carroll @Rockefeller_BRC ; and @The_MRC for funding our work

[Bioconductor @Bioconductor]

BioC2020: mark your calendars! Please see the conference website for more details and some key participation deadlines: https://t.co/mtlhk2sQZh .

[Rockefeller_Bioinformatics @Rockefeller_BRC]

@DrMarkDunning @AioZabala Same here. I would like to take credit :) but all credit due to @AioZabala

[Matt Paul @sciencematt]

Finding Clippy on the manual pages for write_xlsx() is the best/worst surprise. @opencpu