ryanlayer

Making science faster with algorithms. Assistant prof CU Boulder, Computer Science and BioFrontiers.

[Fritz Sedlazeck @sedlazeck]

How to annotated SV with pop. frequency? Using @PacBio & @nanopore! Gnomad 32% & STIX: 95.9% of SV from @GenomeInABottle annotatable!
Huge implications in SV filtering for eg: @GREGoR_research & #cancer & #disease studies!
Lead by @wtoxzpw & @ryanlayer https://t.co/Vg9LRIOM0G

[bioRxiv Bioinfo @biorxiv_bioinfo]

STIX: Long-reads based Accurate Structural Variation Annotation at Population Scale https://t.co/xhpJo73lW0 #biorxiv_bioinfo

[Owen Martin @lepurplemartin]

1/n
🌟🐝🔥 New paper alert 🌟🐝🔥
"Embracing firefly flash pattern variability with data-driven species classification" with @nguyenchantal , @RaphaelSarfati , @DieuMyNguyen , M Iuzzolino, M Chowdhury, @ryanlayer, @oritpeleg

https://t.co/GcHrjg8zhl

[Orit Peleg @oritpeleg]

🌟 Proud to share a new paper on the flash pattern variability of fireflies! Our work, led by @lepurplemartin & @nguyenchantal in collab with @ryanlayer’s lab, offers new insights into species identification through ML data analysis: https://t.co/3XIUQyllEi /1

[Aaron Quinlan @aaronquinlan]

HUGE CONGRATS TO @hdashnow!
https://t.co/aWgv2MeZLJ

[CU Department of Biomedical Informatics (DBMI) @CUBiomedInfo]

Rare disease research is at the forefront of the DBMI's work. When Harriet Dashnow, PhD, (@hdashnow) joins our team this summer, she will focus on computational research, rare genetic disease, and the discovery of new causal variants. Meet Dr. Dashnow 👇
https://t.co/bL66M87uRs

[ryanlayer @ryanlayer]

I am sad to be missing #GI2023, but please check out talks from Christopher and @kschneider_cu on Friday, posters #60 from @michael_boulder and #57 from Morteza Baradar on Thursday, and poster #178 from Xinchang Zhen and @sedlazeck on Friday.

[bioRxiv Bioinfo @biorxiv_bioinfo]

Hypothesis Generation For Rare and Undiagnosed Diseases Through Clustering and Classifying Time-Versioned Biological Ontologies https://t.co/8oT1s7XNoY #biorxiv_bioinfo

[ryanlayer @ryanlayer]

Excited about @michael_boulder's 1st 1st-author paper https://t.co/f6ZE47xlkY Mixed STRING & @hp_ontology. Used time-series learning to id co-clustered genes/traits that may explain unsolved cases. Tested on MyGene2 & @ChildrensColo patients. Slick GUI at https://t.co/hNjSvvHVbZ)

[Dr Harriet Dashnow @hdashnow]

I'm looking for talented postdocs and staff scientists/software developers to join my lab at @CUBiomedInfo
If you're fascinated by #RareDisease genomics, #STRs and computational methods, please get in touch!
I'm at #ASHG2023 this week, and happy to chat. #hiring

[ryanlayer @ryanlayer]

@aaronquinlan I am pretty sure that is from Tripp’s 3rd birthday

[ryanlayer @ryanlayer]

@shishenyxx @UofUGenetics Congrats! Such a great dept.

[ryanlayer @ryanlayer]

@fiamh @aaronquinlan @ZaminIqbal @yokofakun Happy to participate. Just let me know.

[ryanlayer @ryanlayer]

My lab has open positions for developing innovative methods at cross roads of genomics, algorithms, and machine learning. Apply here https://t.co/AH87rRfCpj if you have your MS and here https://t.co/55Ny91AeXK if you have your PhD. Reach out to me directly if you have questions.

[ryanlayer @ryanlayer]

@aaronquinlan @ZaminIqbal @yokofakun It is still around, but We are working on the next generation now.

[Michael Schatz @mike_schatz]

The @jxtxFoundation for Open Science will award six scholarships for the CSHL Biology of Genomes meeting covering full conference registration to outstanding graduate students. Application deadline is February 6, 2023. For details: https://t.co/ZpVkp0T2Vj @cshlmeetings #bog23

[ryanlayer @ryanlayer]

Congrats to Murad Chowdhury! His #ASHG22 poster got a Reviewers Choice Award. Check it out for yourself how he is using population-scale data to improve samplot #SV visualization. PB2317 Thursday 10/27 3-445. https://t.co/Z32Oo8ED58

[ryanlayer @ryanlayer]

Apps are open for Interdisciplinary Quantitative Biology #PhD Program at @CUBoulder @BioFrontiers Learn both sides of #quantitative #biology with funded rotations through wet and dry labs among 11 departments. https://t.co/WVjCdkhO4e

[ryanlayer @ryanlayer]

You are in luck! @BioFrontiers is hiring 2+ asst profs in any area, as long as it's interdisciplinary. Work with some truly impressive people like NSF Waterman awardee @DanLarremore NIH Pioneer @Sara_Sawyer_, HMMIs, NASs, nobel laureate, and, you know, me! https://t.co/k4B923bwQR