SBGN

[SBGN @sbgnnews]

A new version of the file format SBGNML for the graphical representation of biological networks is now available at https://t.co/r2oqIlJa1B @DeGruyterOA

[SysMod @cosi_sysmod]

To join our community meeting, please register at https://t.co/UqUO7ZOG2O. The conference #ISMB2022 will take place in a hybrid format allowing you to participate in person in Madison, WI 🇺🇸 or virtually, depending on your preferences.

[SysMod @cosi_sysmod]

See the program of the SysMod 2022: 2 keynotes, 10 contributed talks, 2 poster highlight flash talks, 25 posters. Presenters come from various countries worldwide 🇺🇸🇬🇧🇨🇭🇭🇺🇩🇪🇮🇳🇫🇷🇱🇺🇮🇷🇬🇷 representing universities, hospitals, research institutes, and industry. https://t.co/73nQVR7DC8

[Dr Anna Niarakis @Annaerial]

Happy to announce that our paper "Addressing barriers in comprehensiveness, accessibility, reusability, interoperability and reproducibility of computational models in systems biology" is now out in BIB! @sylvain_soliman @tomashelikar @JamesAGlazier1
https://t.co/kEblSneSBq

[COMBINE @combine_coord]

Join us October 6-8, 2022 for #COMBINE2022! Co-located with #ICSB2022. In Berlin (Germany).

COMBINE Community meet-up Oct 6-7, 9a.m.-6p.m ** COMBINE Forum Oct 8, 8a.m.-1:30p.m.

Details and Call for papers to come. Be on the look out!

[SBGN @sbgnnews]

This model of 𝘊. 𝘨𝘭𝘶𝘵𝘢𝘮𝘪𝘤𝘶𝘮 comes with a map in #SBGNML format, which we can view in any tool supporting the Systems Biology Graphical Notation. The archive file format “OMEX” enables modelers to bundle graphics and models for joint distribution. Available: @biomodels.

[Bioinformatics and Data Analytics Team (BioDatA) @DraegerLab]

This time we focus on industrial biotechnology and producing amino acids used as dietary additives or for animal feeding. With partners @fz_juelich we created today’s most comprehensive computer model of 𝘊𝘰𝘳𝘺𝘯𝘦𝘣𝘢𝘤𝘵𝘦𝘳𝘪𝘶𝘮 𝘨𝘭𝘶𝘵𝘢𝘮𝘪𝘤𝘶𝘮: https://t.co/xLrl6yqlUf

[SBGN @sbgnnews]

🗳Vote for your representative in the team of SBGN editors before 20 December 2021 at https://t.co/hH15ZcHUWH

The candidates are: @ugurdogrusoz2, @rupertoverall, Adrien Rougny

Please note: Only people already subscribed to the mailing list of sbgn-discuss are eligible to vote.

[Dagmar Waltemath @[email protected] @dagmarwaltemath]

This year's online disease maps community meeting takes place Nov 29-30. Meet the people building covid-19 disease map, disease ontologies, clinical applications... & many more great scientists. https://t.co/ONZ4OfmoaK free registration. Orga @olafwolkenhauer & Team @unirostock

[SBGN @sbgnnews]

It is now the time to nominate new editors to coordinate the ongoing development of the Systems Biology Graphical Notation (SBGN) via https://t.co/D6HdZ0O82i before December 1st, 2021.
We thank @dr_drae and Michael Blinov, whose terms are ending, for their contributions.

[Dr Anna Niarakis @Annaerial]

How cool is that?

[SBGN @sbgnnews]

What a great application for #SBGN in the fight against #COVID19.

[Dr Anna Niarakis @Annaerial]

Our collective efforts paid off! Happy to see the COVID19 Disease Map published in Molecular Systems Biology! @CovidPathways, @Reactome, @WikiPathways and the whole C19DM community - thanks for your enthusiasm and hard work!
https://t.co/fwltWDZ12j

[Reproducible Biomodeling @reprobiomodels]

#COMBINE2021 will be running 23+ breakouts ranging from spec & package developments for @sbmlnews, @sbgnnews, @NeuroML, #SBOL...to #FAIRness & standardised #simulation execution. Full schedule list: https://t.co/ZFdiqPkIGH or register for the meeting.
#systemsbio #systemsbiology

[SBGN @sbgnnews]

LMME (Large Metabolic Model Explorer) is an add-on to the open-source software VANTED to explore extensive metabolic models by decomposing the large network into meaningful subsystems and providing analytic techniques that may be applied successively.
☞ https://t.co/rhNwe16o9O

[Irina Balaur @irinabalaur]

Happy to learn about the SBGN Open Challenge: https://t.co/sz34RygJGX. Feel free to contact organizers and join the project! @sbgnnews @AlexanderMazein @Rougny @Annaerial

[Irina Balaur @irinabalaur]

Great day today ;) Following @CovidGraph community meeting, now @sbgnnews at HARMONY 2021 https://t.co/gWWkXMXCZv @combine_coord #harmony2021 @sched

[SBGN @sbgnnews]

We appreciate Vasundra Touré (@Vsndr_T) and Adrien Rougny, whose term has ended, for their effort and commitment to our community 👏🏻🎉.

🥁We welcome our new editors: Irina Balaur and Alexander Mazein. We are looking forward to a great collaboration on #SBGN development!

[iVis@Bilkent @iVisAtBilkent]

Newt was updated to include some new exciting features including experiment data overlay. Check it out at https://t.co/FJ8ZTYVyAM. @sbgnnews @CS_Bilkent

[SBGN @sbgnnews]

This study demonstrates the usefulness of #SBGN when overlaid with dynamically changing laboratory data, #metabolomics in this case, to visually explore the mechanisms of molecular interactions.
#systemsbiology #Datavisualization

[Bioinformatics and Data Analytics Team (BioDatA) @DraegerLab]

Our research article describes a new method to intuitively visualize time-series metabolomic data as animated videos to view cellular processes in a network context: https://t.co/SWZHAqKQvC. We illustrate the technique with two case studies for human blood cells.
#sysbio #dataviz

[Akira Funahashi @akira_funahashi]

CellDesigner 4.4.2 now supports macOS Catalina. Please have a try. https://t.co/OLJuo4wjqo

[SBGN @sbgnnews]

International systems biologists have now joined forces to visually map all molecular processes triggered by SARS-CoV-2. This effort should aid in a better understanding of the virus.
#COVID19 #sysbio #SARS_COV_2 #SBGN