sharon greenblum

Computational Biologist, Joint Genome Institute @jgi

[Nature Plants @NaturePlants]

The August issue is now fully online, with a beautiful cover that might be a nostalgia trigger for some of us (young people can find an explanation in the Editorial):

https://t.co/plBoYWn5uK

[U.S. Department of Energy @ENERGY]

🎉 @SecGranholm has been recognized by @TIME!

Sec. Granholm is driving the Biden-Harris Administration's climate mission forward, but she isn't doing it alone. We call @ENERGY the “Solutions Department” because our climate achievements are the sum of our collective action.

[Joint Genome Institute @jgi]

Congrats to @simroux_virus, awarded the ASM Microbiome Data Prize for 2025! 🦠

Roux leads the Viral Genomics group within the JGI Metagenome Program. Learn more about his work here: https://t.co/ODxdzx9oEy

[Ronan O'Malley @omalley_ronan]

New preprint! An atlas of conserved TF binding sites across flowering plants generated with multiplexed DAP-seq. When integrated with multi-species snRNA- and snATAC-seq reveals how TF activity shapes development and stress responses at the cellular level.https://t.co/fRvt1Jrg9I

[bioRxiv Genomics @biorxiv_genomic]

An atlas of conserved transcription factor binding sites reveals the cell type-resolved gene regulatory landscape of flowering plants https://t.co/jnbYw5K0wQ #biorxiv_genomic

[Peter Sudmant @psudmant]

We are hiring a technician!  Are you an experimentalist interested in applying cutting edge genomics to questions in somatic mutation, evolution, and aging? Please share and retweet!
https://t.co/8dnyGomjsZ

[Dr. Jonelle T Basso 🇹🇹 @BassoJonelle]

Phages are small but mighty! Interested in how they can influence plant-microbe interactions? Please attend my talk in Ballroom East at 15:40 and my postdoc, Heejung's poster at 16:30 (PS3.17.020), today at #ISME19

[Skyler Berardi @skylerberardi]

I am super excited to share the first paper out of my PhD! Here, we chose D. melanogaster pigmentation as a model phenotype to study the nature and repeatability of complex trait evolution in the field . . .🧵
https://t.co/FF14PMhHrs

[sharon greenblum @sharGblum]

@nanditagarud @UCLAEEB congratulations nandita!! huge and incredibly well-earned achievement!

[Joint Genome Institute @jgi]

The April cover of @NaturePlants features one of the first cross-kingdom spatially-resolved transcriptomics studies to date. The symbiosis between plants and mycorrhizal fungi could improve carbon storage in soil and boost biofuel feedstocks! Learn more: https://t.co/8GgLoUgQcy

[Nature Reviews Microbiology @NatureRevMicro]

Microbial adaptability in changing environments

https://t.co/tcexHDaK9w

This Genome Watch article highlights the recent use of large-scale monitoring of natural microbiomes to examine feedback between environmental change and microbial adaptation. @sharGblum

[Nandita Garud @nanditagarud]

I am looking for a graduate student and a postdoc to join my group! We are a computational group working on understanding evolution in natural populations with a large emphasis on the microbiome. Please get in touch by dm or email! https://t.co/uQRqytlihr

[Emily R. Ebel @Dr_EEbel]

How is 𝘗. 𝘧𝘢𝘭𝘤𝘪𝘱𝘢𝘳𝘶𝘮 SO GOOD at evading host immunity? In our new preprint, we use ultra-long @nanopore reads to discover extra-chromosomal alleles of antigenic 𝘷𝘢𝘳 genes in clonal malaria parasites, @Bernard_Y_Kim👑 @lab_egan @PetrovADmitri https://t.co/EhWE3uOjO1

[Dr. Jonelle T Basso 🇹🇹 @BassoJonelle]

Do plants, bacteria AND phages sound exciting to you? Look
no further! We are hiring for a postdoc in the Plant-Microbial Interactions group @JGI
@BerkeleyLab @LBNLBioSci. Pls RT. Details and application here: https://t.co/7If2FuZcE1

[sharon greenblum @sharGblum]

@PetrovADmitri @SusanneTilk @cncurtis Congrats Dr Tilk!! I so loved working with you (🏂4lyfe!), learned a ton from your defense talk, and know you'll be amazing at whatever is next!

[sharon greenblum @sharGblum]

@viviankchen @GrantKinsler congrats @GrantKinsler, you're amazing!!! (and superb illustrations @viviankchen, wow!)

[sharon greenblum @sharGblum]

I truly could not have asked for a better team to work on this with, from start to finish. Big big ups to @SethRudman @SusanneTilk @PetrovADmitri and @paulrschmidt (and Tuya!)

[sharon greenblum @sharGblum]

How do species stay afloat when the environment keeps rocking back and forth? They adapt!
Check out our new paper to see how :)

[Seth Rudman @SethRudman]

Out today in @ScienceMagazine we show how populations adaptively track environmental change using a field experiment: https://t.co/lEP7vRWd8b

[sharon greenblum @sharGblum]

@RoshniAPatel @StanfordMed congrats, that's fantastic!

[sharon greenblum @sharGblum]

@diane_dickel @BerkeleyLab @LBNLBioSci Best of luck in your new role Diane! And thank you for introducing me to LBNL!