Sofya Marchenko

PhD student @chariteberlin @CompCancerRTG single-cell omics and other #bioinformatics thingys

[Sofya Marchenko @SofyaMa]

My first first-authorship is now published! In this work we used immunohistochemistry and mRNA data to demonstrate the prognostic impact of different subsets of #Tcells in high-grade serous #ovarian #carcinoma. @ChariteBerlin @CompCancerRTG https://t.co/GRe22HxEQF

[Sofya Marchenko @SofyaMa]

@elonmusk @elonmusk why have you never gone to space ??

[Dileshi Bulathsinhala @DileshiB]

Day 3 of the CompCancer Retreat in beautiful Lübbenau wrapped up yesterday! An inspiring dive into the computational approaches in cancer research, and the discussions were both insightful and motivational! Thank you to Vanessa and the PIs for making it possible. @CompCancerRTG

[CompCancer @CompCancerRTG]

We had a great retreat in Spreewald, 3 days packed with science, discussions, fun!

[Sofya Marchenko @SofyaMa]

@charles_bell92 I’m looking for a man in finance …

[Sofya Marchenko @SofyaMa]

@buitengebieden @karyTristanBio1

[Dileshi Bulathsinhala @DileshiB]

📍Posting live from the grounds of @ChariteBerlin in Mitte! We @compcancer are showcasing the importance of computational tools in cancer research at the Long Night of Science @lndwberlin.
@SidAnnaldasula @JavierMarchenaH

[CompCancer @CompCancerRTG]

Most tumours arise from aberrant signalling, leading to the deregulated proteomes. Tomorrow, at the @lndwberlin we will present the board game "GeneExpress" that illustrates the processes from signals to protein expression. Try it out at the @ChariteBerlin campus Mitte.

[Sofya Marchenko @SofyaMa]

@career_re @karyTristanBio1

[Sofya Marchenko @SofyaMa]

@OdedRechavi @rosasta_g

[Nils Blüthgen @molsysbio]

Using CyTOF for signaling investigations? CyTOF data shows strong covariance between nearly all markers, caused by variations in cell size and probably also labeling. Spearheaded by @rosasta_g, we developed RUCova to remove such unwanted covariance. https://t.co/TPGOcde4ae.

[CompCancer @CompCancerRTG]

Join us tomorrow for the start of our new colloquium series on evolving cancer genomes with Isidro Cortes Ciriano @isidrolauscher. 4pm at Maud Menten room, House 18, HU Campus Nord (Philippstr. 13)

[Björn Schumacher @schumacherbj]

Why sometimes you need a PI

[Selbach Lab @SelbachLab]

Read our latest preprint on targeted phosphoproteomics: "Spike-in enhanced phosphoproteomics uncovers synergistic signaling responses to MEK inhibition in colon cancer cells.": https://t.co/UdzO3X4XQt

#Phosphoproteomics #DIA #CancerResearch #Signaling #ColonCancer

[Sofya Marchenko @SofyaMa]

Join us for our next edition of the @CompCancerRTG Industry Seminar with the esteemed @PaulaPetrone1 ! 🚀
📅 Date: 16.5.2024
⏰ Time: 03:30 pm UCT+1
📍 Zoom-Link: https://t.co/7GbKkvA03r

See you there! 🌟 #CareerDevelopment #ProfessionalGrowth #CompCancer #WomeninSTEM

[Sofya Marchenko @SofyaMa]

https://t.co/dzeoZQpk6t 🧬🔬🔥

[Stefan Peidli @SPeidli]

Very unique data with mutliple doses and time points after infection. We had lots of opportunity for data analysis. And go check out the amazing diffusion map we got for the endothelials!

[Sofya Marchenko @SofyaMa]

@dog_rates @ZiskaKistner

[Sofya Marchenko @SofyaMa]

Very happy to see this one out! Great paper in which my colleagues and I present the imapct of IDO1 in ovarian cancer unsing bulk and scRNA seq. 🧬🔬https://t.co/gLF6hdkDe4

[CompCancer @CompCancerRTG]

First day of CompCancer retreat, great talks and outdoor poster session!

[Ivan Alcantara @ivancalcantara]

Found this in my notes app from 2019 and I really wanna know what these sequences were for