CompCancer

PhD Programme in Computational Cancer Research in Berlin, @dfg_public founded, RTG2424, @ChariteBerlin @HumboldtUNI @MDC_Berlin @IRILifeSciences

[CompCancer @CompCancerRTG]

New positions for PhD students in computational cancer research in Berlin within the graduate program CompCancer!
Apply here: https://t.co/YFkQGV7pVn
More info: https://t.co/zOvvSzSX74

[CompCancer @CompCancerRTG]

CompCancer is now also over there, where the sky is blue: @compcancer.bsky.social

[CompCancer @CompCancerRTG]

Congratulations to David Steinbrecht for for his new paper in Molecular Systems Biology!

[Nils Blüthgen @molsysbio]

How long does an mRNA stay in the nucleus? How long does it stay in the cytoplasm? Together with
@landthaler_m's group , we used metabolic labeling, cell fractionation and mathematical modeling to quantify mRNA flow through the cell. Finally out in MSB https://t.co/ycYZdb6Axt

[CompCancer @CompCancerRTG]

Check out this game - co developed by CompCancer student @JenWiederspahn

[Stiftung Charité @StiftungCharite]

Wenn Biologie auf Spieltheorie trifft: Stolz vorgestellt haben das gemeinsam entwickelte Brettspiel Wissenschaftskommunikator Russ Hodge und Game Designer Steffen Bogen. Nicht auf dem Bild, aber als Lebenswissenschaftlerin involviert war Jennifer von Schlichting (@ChariteBerlin).

[CompCancer @CompCancerRTG]

Congratulations to Dagmar Kainmüller @kainmuellerd to be part of this series of the 100 most important researchers in Berlin!

[Max Delbrück Center @MDC_Berlin]

In the last part of its "100 most important minds of Berlin's science" series, the @Tagesspiegel | @TspWissenschaft featured #mdcBerlin researcher and group leader Dagmar Kainmüller! Congratulations 🥳 https://t.co/ePbICZ9z1A (German, paywall)

[Nils Blüthgen @molsysbio]

How does the immune response differ between kids and older people? Nice explainer 🧵 of our new preprint with the @SawitzkiLab 👇

[CompCancer @CompCancerRTG]

Great new preprint with contributions from @rosasta_g @molsysbio

[Nils Blüthgen @molsysbio]

How does the immune response at first virus contact differ between kids and older people? Data from larger Covid cohorts help to disentangle this https://t.co/vYp3KIZocS

[Dileshi Bulathsinhala @DileshiB]

🚨 Last poster presentation of the year! 🚨 Wrapping up summer with the CRC1588 Late Summer School.
Huge thanks to our guest speaker, José Manuel Gracia-Aznar, who joined us from Spain to discuss building patient-specific neuroblastoma models using image-based biomarkers.

[Dileshi Bulathsinhala @DileshiB]

Day 3 of the CompCancer Retreat in beautiful Lübbenau wrapped up yesterday! An inspiring dive into the computational approaches in cancer research, and the discussions were both insightful and motivational! Thank you to Vanessa and the PIs for making it possible. @CompCancerRTG

[CompCancer @CompCancerRTG]

We had a great retreat in Spreewald, 3 days packed with science, discussions, fun!

[CompCancer @CompCancerRTG]

Congratulations to @CarolinEctor from @Granadalab for her new paper on circadian influence on the sensitivity to anti cancer drugs! Great work!

[Carolin Ector @CarolinEctor]

Excited to share the publication of my first paper in
@NatureComms, introducing a comprehensive approach to study time-of-day effects of anti-#cancer drugs ⏰

Many thanks to the whole team, especially Adrián @Granada_Lab! Check out our work here: https://t.co/Ro4SmWZqYR

[CompCancer @CompCancerRTG]

Congratulations, @mada48422514 !!!

[Mădălina Giurgiu @mada48422514]

I am thrilled to share our latest research about reconstructing #ecDNA elements from long-read #nanopore sequencing, now published in @genomeresearch!

Manuscript https://t.co/V6DYbTOCv5 1/

@ChariteBerlin @MDC_Berlin
#ecDNA @CancerGrand

[CompCancer @CompCancerRTG]

Congratiolations to @rosasta_g and @rosasta_g!

[Nils Blüthgen @molsysbio]

Out now on @biorxivpreprint: w/ Markus Morkel's group on "Tracking CRC cells resistant to active-state RAS inhibition as they emerge". Uses a modified FIRE reporter system (@albecklab) for monitoring ERK activity in the nucleus and the cytoplasm. https://t.co/fUjIBFtjT2

[Dileshi Bulathsinhala @DileshiB]

📍Posting live from the grounds of @ChariteBerlin in Mitte! We @compcancer are showcasing the importance of computational tools in cancer research at the Long Night of Science @lndwberlin.
@SidAnnaldasula @JavierMarchenaH

[Javier Marchena-Hurtado @JavierMarchenaH]

Very happy to be here showing what we do to all kinds of people!

[CompCancer @CompCancerRTG]

The game has been developed by Ross Hodge (MDC) and CompCancer PhD student @JenWiederspahn with generous funding from @StiftungCharite!

[CompCancer @CompCancerRTG]

Most tumours arise from aberrant signalling, leading to the deregulated proteomes. Tomorrow, at the @lndwberlin we will present the board game "GeneExpress" that illustrates the processes from signals to protein expression. Try it out at the @ChariteBerlin campus Mitte.

[CompCancer @CompCancerRTG]

Congratulations to CompCancer graduate @Speidli for the publication in Cell Reports, covered by German newspaper @Tagesspiegel: Warum Covid-19 mal schwer und mal mild verläuft: Immunzellen, die sich nicht deaktivieren lassen https://t.co/7OM97IgYmS

[CompCancer @CompCancerRTG]

Last day of the Single cell methods for B and T cell receptor repertoire dynamics workshop by CompCancer and CUBI. Thanks to all speakers for their stimulating talks and all participants for the lively discussion!

[CompCancer @CompCancerRTG]

Congratulations, @rosasta_g !

[Nils Blüthgen @molsysbio]

Using CyTOF for signaling investigations? CyTOF data shows strong covariance between nearly all markers, caused by variations in cell size and probably also labeling. Spearheaded by @rosasta_g, we developed RUCova to remove such unwanted covariance. https://t.co/TPGOcde4ae.