Supratim Mukherjee

Data Scientist @JGI, @BerkeleyLab, Genomics, Microbiome, Genome Standards, Metadata, Table Tennis Enthusiast🏓, Suffers from Acute Optimism

[TBK Reddy @tbk_reddy]

We are hosting a workshop titled “Genomes Online Database (GOLD) – A curated metadata resource for powering discoveries” at the Biocuration 2025 conference on April 6th, 10:30 AM to 12:30PM US CST.
Register to Join over the Zoom https://t.co/WojICcd73s

[TBK Reddy @tbk_reddy]

Exciting News! Our manuscript is now public.

Dive into the latest updates!

Genomes OnLine Database (GOLD) v.10: new features and updates https://t.co/AuuRYzWBE6

Thrilled to share this work with the community! @jgi @LBNLBioSci @biocurator @ResearchOrgs @genomestandards

[Supratim Mukherjee @supramuk]

There is no replacement for quality metadata. Catch our stellar interns @VanHanke & @Anuhareddy again tomorrow to learn how Genomes OnLine Database can help power your discoveries at #JGI2024

[Supratim Mukherjee @supramuk]

#aurora #California #Eastbay Kirker Pass @nbcbayarea

[Matthias Fischer @the_fischer_lab]

Coming soon to a preprint server near you: viruses like you've (probably) never seen them before!

[TBK Reddy @tbk_reddy]

We celebrate #WorldMicrobiomeDay by sharing a publication describing "Standardized naming of microbiome samples in Genomes OnLine Database" https://t.co/jgzl2LsLXF Access 197K manually curated microbiome samples at https://t.co/yZbQN6vvtc @jgi @DOEKBase @MicrobiomeData @IMG_DATA

[Integrated Microbial Genomes & Microbiomes (IMG/M) @IMG_DATA]

Learn how to use @IMG_DATA to analyze your (meta)genomics and viral genomics data. Next workshop is on October 23-27, 2023 at the @JGI. Registration is now open here: https://t.co/q4VR2wg8sT

[Supratim Mukherjee @supramuk]

Did you always wish for standardized names for #microbiome samples? Your wish just came true! Check out this latest paper from the #GOLD team @jgi on how you can describe your #metagenomes and #metatranscriptomes with curated, easy-to-understand names https://t.co/gcHUNHQkVS

[Joint Genome Institute @jgi]

DYK the @JGI’s Genomes OnLine Database (https://t.co/YS9iVrhGy3) started out as just six projects on a spreadsheet? Now, 25 years later, it’s a flagship genomic #metadata repository.

Learn more: https://t.co/5F9xplLj2E
#GOLD #JGI25

https://t.co/Ib23Uaeno3

[Supratim Mukherjee @supramuk]

Thank you @airvistara crew for the special surprise above the clouds..!! Much appreciated ❤️Alex

[Joint Genome Institute @jgi]

The latest chapter to the Genomic Encyclopedia of Bacteria and Archaea in @CellGenomics: 1000s of biosynthetic gene clusters ID'd in Actinobacteria. From team led by @jgi @Leibniz_DSMZ_en. @kyrpides @NigelJMouncey @BerkeleyLab
https://t.co/XZjZ1i6sFc

[TBK Reddy @tbk_reddy]

Serving #microbial and #microbiome research community with manually curated #metadata by adhering to @genomestandards and @FAIRsharing_org principles.
Twenty-five years of Genomes OnLine Database (GOLD): data updates and new features in v.9 https://t.co/EAVYxhyKjw
@jgi @NAR_Open

[Joint Genome Institute @jgi]

"Ask us about our research and we'll describe it as cutting edge, advanced, state-of-the-art and sometimes, just plain cool." -@doescience
https://t.co/URiEf32mo8

[Supratim Mukherjee @supramuk]

@Dr_AlphaLyrae Where are you competing/practicing? I used to frequent the East Bay (Berkeley/Concord) leagues back in the day..

[Supratim Mukherjee @supramuk]

@Dr_AlphaLyrae Q: How are the leaves so nice and healthy without bite marks? Here is another view of.. well a different plant 😂 And yes that is a bitter apple repellent spray that has no effect on our 🐈

[Supratim Mukherjee @supramuk]

@SouthwestAir #Boston for Xmas with CP..!!

[@AxelVisel.bsky.social @AxelVisel]

The GOLD database helps @JGI's users to find treasures within our >1.1M genome datasets.

If you're a software developer and want to become part of this effort, we're hiring:
https://t.co/ufRmxMMBve

[TBK Reddy @tbk_reddy]

Exciting career opportunity to those who have a passion for #coding and also like to relish on some science on the side, here is a great opportunity as a #SoftwareDeveloper at the Genomes OnLine Database (https://t.co/7ORJh5vFwW).

https://t.co/Ac0SajAH4I

[Joint Genome Institute @jgi]

“Looking across the tree of life, it’s striking how many uncultivated lineages are only represented by metagenome-assembled genomes (MAGs),” Stephen Nayfach, @jgi. Learn more at https://t.co/xL8u5w4d49 (Art: Zosia Rostomian/@BerkeleyLab) #microbiomes

[Supratim Mukherjee @supramuk]

Just swinging by to check if #COVIDー19 is still around?? None of the news outlets seem to have any updates of late