Tom Harrop

[Galaxy Australia @GalaxyAustralia]

Lead developer (at @MelBioInf) on the Janis “Portable Pipelines Project”, an exciting system that simplifies the specification of complex analysis workflows and their deployment on HPC and Cloud systems https://t.co/Ma7Ngge7MJ #UseGalaxy

[Australian BioCommons @AusBiocommons]

Are you a #biologist who wants to analyse RNAseq data?

Join our workshop with @MelBIoInf to find out how you can get from reads to differentially expressed genes using @GalaxyAustralia and without needing programming experience.

Applications now open: https://t.co/dN83cAlHok

[Dr Roz Eggo @rozeggo]

Are things that academia values, the most important things in modern science? @AdamJKucharski @sbfnk & I argue probably not.
I hope this can change: many people are doing valuable technical work & they are - & should be able to stay - a part of science. https://t.co/CYXSyZk7eE

[Tom Harrop @tharrop_]

@dnatured Thanks John. It’s definitely a tricky locus to sequence.

[Tom Harrop @tharrop_]

Sequencing and bioinformatics by Otago Genomics and @PhaseGenomics. And of course a bunch of the @peterkdearden lab people worked on the annotation led by @JosephGuhlin.

[Tom Harrop @tharrop_]

Great to have these quality genomes and annotations out - and it was the work of many!

Erin Wilson-Rankin and Jessica Purcell from UC Riverside did the western yellowjacket assembly.

[Phase Genomics @PhaseGenomics]

Read the new paper on social #wasps and how assembling their #genomes will contribute to the future of pest control. Thank you to @tharrop_ and team! Learn more... https://t.co/jqxdP6qASX

[Tom Harrop @tharrop_]

Monica Gruber and @pjlester's team at VUW did the field work and RNAseq. @e_j_duncan and her team at Leeds Uni did the methylation analysis. @EmsyRemsy from Sydney Uni worked on viral contigs.

[GeorgeNegus @GeorgeNegus]

GeorgeNegus

[Bioprotection Aotearoa @BioprotectionNZ]

More in the continuing story of how Argentine stem weevils have out-evolved the parasitoid wasp introduced to control them.

[Misha Kolmogorov @MishaKolmogorov]

Flye 2.7 is out! Many improvements for assembly of real (and complex) metagenomes + new mode to reveal alternative haplotypes on the graph. Here is a bacterium that lives in sheep gut and supposedly is represented in many closely-related strains/species. https://t.co/gNFND8RKIS

[Tom Harrop @tharrop_]

@DrT1973 @schwessinger @Vikash3217 @nanopore @longreadclub @protocolsIO Thanks @DrT1973! Not sure if twitter mangled your link but this one works for me:

https://t.co/hyG4NAe2s5

[Tom Harrop @tharrop_]

@JosephGuhlin @peterkdearden this is how we basecall nanopore data in summer!

[Tom Harrop @tharrop_]

@schwessinger @LokeStella @DrKirston @gringene_bio @DrT1973 @AdvancedTwigTec @BiologyANU Thanks for putting together an amazing workshop and an awesome group. I had a great time and learned a lot. Cheers!

[Tom Harrop @tharrop_]

Hi @DnCityCouncil, there is a lot of debris in the Harbourside cycleway on Fryatt St. Picked this up today, but I get flats there quite often. Can we get a sweep? 🧹

[Dr Tim Kahlke @AdvancedTwigTec]

Join us 11.-15. Nov at ANU for a Long-read sequencing workshop with hands on DNA extraction, sequencing and data analysis sessions, great speakers and heaps of science!!!
#Bioinformatics #Genomics #longreads #nonmodelorganisms https://t.co/LbTK0LqNWV

[Tom Harrop @tharrop_]

Rice genes so nice, they evolved twice 🌾🌾

We used #rnaseq to look for parallel evolution of gene expression in #domestication of Asian and African #rice.

https://t.co/rLEyngsk9D

[Tom Harrop @tharrop_]

Hi @myrepublicnz, because of an ongoing speed issue (1766643) we've decided to try a different provider. How do we cancel our MyRepublic service, and how soon can we change? We're on month-to-month. Thanks!

[Tom Harrop @tharrop_]

@schwessinger @ImRam_Nagar Nice, thanks for posting that! Do you have any idea what the AMPure XP equivalent is of 0.5V of homemade SPRI beads? Asking for a friend who hasn't got around to making their own bead solution yet...

[Tom Harrop @tharrop_]

@DnCityCouncil Hi again @DnCityCouncil. There are still trailers here every morning. Do you need more photos?

[Tom Harrop @tharrop_]

Hi @DnCityCouncil, are you aware that Summerland stores trailers in the cycleway on Kitchener St? Creates a hazard because people on bikes have to merge into the traffic lane and blocks intersection with French St.