The second half of my dissertation work is now up on bioRxiv! Here we examine the contribution of the functional domains of Dystroglycan to inhibitory MLI:PC synapses in cerebellar cortex 🧵
@Awedness Thanks Wendy! I do always post fix for 30 mins - I wouldn’t say it’s necessary but it helps with the tissue integrity since I don’t perfuse with a ton of PFA. I plop the entire brain in PFA for 30 mins at room temp, I don’t block the cerebellum off until I’m ready to section.
In summary:
- Dag1 glycosylation = formation + function
- Dag1 ICD = function
We think that extracellular interactions likely with a Nrxn family member is supporting synapse structure whereas indirect intracellular interactions are supporting synapse function.
What about intracellular interactions? I generated a PC specific Dystroglycan ICD truncation to get at this question. Interestingly, these mice had impaired synapse function but totally normal synapse formation.
@HeijdenLab This paper was very close to being a bunch of appendices in my dissertation and supplements to a paper but when we realized what we had we decided to make something out of it! Really glad we did.
@neurodevKathy Thanks Kathleen! This was a couple years of trial and error. I learned a lot and I hope others can learn from from my experience as well!
A couple important lessons here. (1) Characterize your Cre line! It might not do what you think it does. (2) Reporter expression ≠ target gene deletion.
Do you study cerebellar Purkinje cells? Do you use conditional genetics to manipulate said Purkinje cells? Friend, do I have a paper for you: Tools for Cre-Mediated Conditional Deletion of Floxed Alleles from Developing Cerebellar Purkinje Cells https://t.co/MX24F8OmIr
For kicks, I also characterized the timecourse of reporter expression and Dystroglycan deletion using virally expressed Cre (AAV8-CMV-Cre at P0) and found a similar timecourse to that of Pcp2-Cre.