Greg Operto

Neuroimaging researcher at Barcelonaβeta @fpmaragall @UPFBarcelona | Alzheimer's, neuroinformatics, Python | Ex-@Neurospin_91

[Greg Operto @xgrg]

Ending 2021 tired but a promise is a promise. Here it is🎁.

pip install ggseg==0.1

https://t.co/arVjgLOdR8

[Gemma Salvadó @gesalbla]

🔴Paper alert🔴
This took a lot of time and effort but happy to share it.
We found that altered CSF biomarkers of #amyloid, #tau, and #glial response were associated with higher volumes of grey matter and increased glucose metabolism in early #Alzheimer
https://t.co/SusGoDAjqP

[Greg Operto @xgrg]

@srirangakashyap So happy about it. Please let us know if we can help in any way. Have a great #ISMRM22

[SK now on BlueSky @srirangakashyap]

Excellent presentation by @xgrg on XNAT and integration of modular tools that enable effective analysis and importantly QC. #ISMRM22 #BigDataMRI

[Eider Arenaza-Urquijo @ArenazaEider]

I am gonna practise public #selflove and #self-acknowledgment in a moment in my career that is no easy

I am so happy to be ranked
#1 #cognitivereserve expert in Spain,
#3 in Europe and
#10 internationlly by the bibliometric website expertscape @Daily_Experts

[Neuroanato 2.0 @Cuneatos]

Jean Talairach, Psiquiatra y Neurocirujano y su excelente obra neuroanatómica.

[Federico Claudi @Federico_claudi]

Inspired by: https://t.co/1qkSP63T5R

[Federico Claudi @Federico_claudi]

New @brain_globe software out!

Make good looking 3D heatmaps in <20 lines of code!

[Greg Operto @xgrg]

Thank you @_JakeVogel_ for this nice tweet. Irony of life this comes at a moment when reading that kind of thing has the most beneficial impact. Looking forward to reading your abstracts!

Let me share the pride with the great @DrMowinckels, author of the original project.

[Jake Vogel @_JakeVogel_]

I ended up using this recently. Was super easy to use and got great results that are going into my AAIC abstract! :) Thanks @xgrg

[Greg Operto @xgrg]

@_JakeVogel_ @relajoie @DrMowinckels Again thank you both for the insightful feedback and kind interest.

[Greg Operto @xgrg]

@_JakeVogel_ @relajoie Regarding the border width, what I can say is @DrMowinckels & I have planned to improve the R to Python atlas translation, possibly w/ some procedure to build new ones or fix specific areas. Right now there'd still be a way to hack the contours if in hurry/feeling adventurous.

[Greg Operto @xgrg]

@prashvemuri Thank you so much for the kind comment

[Prashanthi Vemuri @prashvemuri]

Do we have a winner for JHU WM illustrations here ...

[Greg Operto @xgrg]

@WenjunSu_ So far it is just Desikan/JHU WM/FreeSurfer aseg. Hippo subfields would be a great addition though. We should write a tutorial on how to add new atlases.

[Greg Operto @xgrg]

Ending 2021 tired but a promise is a promise. Here it is🎁.

pip install ggseg==0.1

https://t.co/arVjgLOdR8

[Greg Operto @xgrg]

@DrMowinckels So happy that you like it @DrMowinckels 🙏. Indeed it'd be great if atlases were easier to port!

[Greg Operto @xgrg]

@drwillscotton Thanks! We still need to work on a tutorial on how to include new atlases/adapt those from the original R package.

[Federico Claudi @Federico_claudi]

Sounds like brainrender should have something like this 🤔

What do you think @adamltyson @l_petrucco

[Jake Vogel @_JakeVogel_]

Python based ROI painter!!