BioImage Archive

The BioImage Archive at EMBL-EBI stores and distributes biological images that are useful to life-science researchers.

[AI4Life Team @AI4LifeTeam]

🚨 Save the Date! 🚨
AI4Life & @GloBIAS_ are hosting a 4-part webinar series to showcase AI4Life services and lessons learned.

📅 When: Feb 13, Apr 10, Jun 12, Aug 14
🖥️ How: Online | 🎥 Recorded
🔗 Registration: https://t.co/9TdywIGrgy

[EMBL-EBI Training @EBItraining]

Deadline extension alert! You now have until 19 January to apply for this course that will show how public bioimaging data resources, centred around the @BioimageA, enable and enhance machine learning based image analysis: https://t.co/YbmPntQm6M

[BioImage Archive @BioimageA]

Join our wonderful team at EMBL-EBI! We are hiring a data steward with #microscopy experience. You will get to collaborate with scientists and provide training to address the imaging community needs in data management #BioImaging #DataSteward
https://t.co/tKTDc7lvLe

[BioImage Archive @BioimageA]

You can now find us on @bluesky! https://t.co/bSUEqQ6Ot9

[Euro-BioImaging ERIC @EuroBioImaging]

Looking for a recipe for depositing bioimage #data in the @BioimageA? Check out the step-by-step process developed by #EuroBioImaging's FAIR Image Data Steward published in @ELIXIREurope's #FAIRdata Cookbook⤵️
https://t.co/geCrFlab9x

[AI4Life Team @AI4LifeTeam]

Wrapping up a fantastic week at the #BioHackEU24 🎉 Project 17 worked (also) on the future integration of @BioimageA and @bioimageio with #useGalaxy, which will enable automatic import of both images and #AI models, streamlining automated #ImageAnalysis workflows.

[BioImage Archive @BioimageA]

Starting the second day of the #foundingGIDE meeting in Okazaki, Japan. All about metadata, data models and ontologies and why we need them:

[GIDE @GIDEproject]

Day 1 of the #foundingGIDE Community Event wrapped up with a dynamic panel on open science and image #DataManagement.

Representatives from @EuroBioImaging, @UNESCO, @NIG_idenken, @EMBL, @emblebi and @zeiss_micro discussed data accessibility and #Interoperability in #bioimaging

[AI4Life Team @AI4LifeTeam]

Life scientists! The 3rd (and last) AI4Life Open Call is officially open! 🎉 We are offering deep learning support for bioimage analysis. Apply now!

🔗 https://t.co/IVdVzik01N
⏳ Deadline: December 10, 2024
@REA_research #AI #Bioimaging #Imaging #ImageAnalysis #DeepLearning

[GIDE @GIDEproject]

#foundingGIDE Community Event is ON 📢 hosted by @riken_en in Okazaki 🇯🇵

Looking at 1.5 days full of insights into how we as a community can enhance image data #interoperability, harmonizing #metadata and #ontology to lay the foundations of a Global Image Data Ecosystem #GIDE!

[Euro-BioImaging ERIC @EuroBioImaging]

How can you take your data one important step closer to #FAIRdata 🤔? Check out #EuroBioImaging's FAIR image data decision tree🌳- designed to guide you in the selection of appropriate repositories.
Separate trees exist for different image data types!
Check it out⤵️
https://t.co/jYz8pdVDDR

[BioImage Archive @BioimageA]

We're thrilled to be contributing to the new Human Protein Atlas release (full of new features!) by making over 10 million raw images accessible to all🌐Dive in to this expansive - 300 TB- image dataset that helped unlock insights into human protein expressions! #OpenScience

[Human Protein Atlas @ProteinAtlas]

A new version 24 of the Human Protein Atlas resource has been released at the HUPO meeting in Dresden, Germany. The data is summarized in eight resources covering different aspects of human protein-coding genes in tissues, cells, cell lines and blood.

https://t.co/U18BHVMXYF

[Virginie Uhlmann @VirginieUhlmann]

If you didn't yet have enough good reasons to share your bioimage data, Matthew (@BioimageA), Josh (@notjustmoore), Erin (@tuesdaystitches), Assaf (@AssafZaritsky) and I are here with squirrel drawings to convince you that you should do it:
https://t.co/CEAjC8qFwo

[AI4Life Team @AI4LifeTeam]

@BioimageA is a key partner in AI4Life, contributing significantly to the standardization of metadata for AI-ready datasets—a highly relevant topic in the bioimaging community! 🔥
Check out the preprint that details this work: https://t.co/PBH0XjxeB5

[BioImage Archive @BioimageA]

Today we showed how we are making our #AI-ready datasets #FAIR at the @AI4LifeTeam general assembly at @humantechnopole!

[AI4Life Team @AI4LifeTeam]

Demo 3 is titled "FAIR - not just a buzzword!" with (1/3) @BioimageA covering FAIR #AI-ready datasets

[EMBL-EBI Training @EBItraining]

There’s still time to join tomorrow’s #webinar to discover the utilisation of #WebAtlas and @BioimageA in visualising #spatialtranscriptomics and imaging data. Registration is free but essential: https://t.co/a8uREWJ5L9 #singlecell #DataScience
@sangerinstitute @bayraktar_lab

[RMS @RoyalMicroSoc]

📢Frontiers in Bioimaging 2024: Book now!

Don't miss this great meeting, focusing on latest developments in both optical and electron microscopy, as well as image analysis.

Register now: https://t.co/Ti3rOHM50e

[Patricia Carvajal @canicamxli]

El periodo de aplicaciones ha iniciado.
Aplicaremos mejores prácticas en el uso de recursos públicos de bioimágenes, como @BioimageA e #IDR, dando pie al análisis de bioimágenes utilizando metodologías basadas en aprendizaje automático 🍃🐭🦠🐠🔬🖥️⌨️🤖

[EMBL-EBI Training @EBItraining]

Join our #webinar next week to discover #WebAtlas, a tool for visualising #SpatialTranscriptomics data and #BioImageArchive, an #OpenAccess data archive for biological imaging data. Registration is free but essential: https://t.co/a8uREWJ5L9 #singlecell #spatialomics #DataScience

[Euro-BioImaging ERIC @EuroBioImaging]

What an amazing project 🤩! With BY-COVID, we mobilised multiple valuable COVID-19 image datasets to @BioImageA, who implemented recognition for the important role of Data Stewards towards sharing #FAIRdata. Check out all the project outcomes in this beautiful brochure ⤵️