Thrilled to see our paper out in the world! 🎉 It was an absolute privilege working with this brilliant team. I'm deeply grateful for the trust and support from my mentor @IamLinghua and my incredible collaborators Florencia McAllister, @ldiaz1971, colleagues
@UTMDAnderson
.
Huge congratulations to Florencia and the outstanding team @ldiaz1971, especially the co-first authors Haoyue, Jeong-Hong, and my postdoc @FuduanPeng, for this amazing work🌟. Grateful to have contributed to this exciting team effort.
🧬 Over 94,000 completely novel lncRNAs discovered. A comprehensive study in @NatureMethods has mapped the spatial landscape of non-coding RNAs across 13 solid tumors. By integrating single-cell and spatial transcriptomics, researchers compiled the SPanC-Lnc database. 🧵
Mapping of immune cells in 3D in the vicinity of precancers of the human pancreas (PanIN) at single-cell resolution.
We used CODA.
Read about it here:https://t.co/I67TTPPwMm
Excited to share our new bioRxiv: scLASER, a framework for modeling and simulating longitudinal single-cell dynamics in clinical studies, led by outstanding lab member @VanderlindenLA 🎉
- Preprint: https://t.co/DvQ180AdlQ
- Software: https://t.co/WXEMrQZrmN
Today, we celebrate the mothers and mother figures who bring strength, love and comfort to those around them. We also hold close those remembering them today. Happy Mother’s Day from UT MD Anderson. #EndCancer
Check out our recent work on @NatureComms! Greatly appreciate my mentors and collaborators making this possible. We developed epi-Patho-DBiT, a unified platform that enables spatially resolved ATAC -seq or CUT&Tag analyses in FFPE tissues!
The difference between doing a project and presenting it. An observation can lead to many avenues of explorations before focus turns to a specific discovery. Presenting it, in a talk / paper, follows inversely, with broad perspectives coming before & after the specific discovery.
Researchers are using advanced imaging to view cancer environments in 3D.
At the James P. Allison Institute Hackathon, teams are accelerating this kind of innovation, turning complex data into insights that could shape future treatments for hard-to-treat cancers. #EndCancer
1/ Thrilled to share our new paper, out today in @Nature: "Non-invasive profiling of the tumour microenvironment with spatial ecotypes".
Paper (open access): https://t.co/EujZFqU7wi
Deeply grateful to Peggy and Carl Sewell for their visionary $10M gift and their trust in our mission. With this transformative support, we are building a new scientific frontier at @UTMDAnderson to decode the "language" of cancer. https://t.co/Z7THMXadc1
Thrilled to announce that my leading Research Topic on Tumor Microenvironment, Single-cell & Spatial Transcriptomics is now live in Frontiers in Immunology (IF=5.9). Looking forward to your groundbreaking submissions!🥳👇
https://t.co/yJhSkowhU3
CODA mapping reveals that 100% of fallopian tubes of healthy women contain precancers!
The standard SEE-FIM protocol misses most of them due to undersampling. But our exhaustive assessment reveals that both pre- and postmenopausal women have them.
Here: https://t.co/UoTgbRK93s