Gaowen Liu

focused on yeast genome evolution research

[Bloomberg @business]

Medra Raises $52 Million to Speed Drug Discovery With AI Robots https://t.co/TDan8gaAxS

[Joseph Schacherer @jo_schacherer]

✨ Latest exciting story of @haploteam in @Nature. Here, we go beyond SNPs and built a species-wide atlas of genetic variants in yeast. With >1,000 near T2T genomes, we show how SVs shape the phenotypic landscape.
@InstUnivFr @ERC_Research @CNRSbiologie
https://t.co/RE7ec6K6Ru

[Jun Cheng @s6juncheng]

Excited to share #AlphaGenome, a start of our AlphaGenome named journey to decipher the regulatory genome! The model matches or exceeds top-performing external models on 24 out of 26 variant evaluations, across a wide range of biological modalities.1/6

[EvomicsLab @EvomicsLab]

Our ScRAPdb paper is finally out at @NAR_Open > https://t.co/xtFRx6BReF , in which we assembled a #pangenome x #multiomics database for the iconic model organism S. cerevisiae. This is one step forward for the ScRAP project and we expected many more to come. Read more >

[Gaowen Liu @GaowenLiu]

@Nature OMG!

[Gaowen Liu @GaowenLiu]

@BAG_OFSP_UFSP OMG!

[Gaowen Liu @GaowenLiu]

@Nature Great!

[Gaowen Liu @GaowenLiu]

@TraverHart Yes, please

[Gaowen Liu @GaowenLiu]

@nzmyachie OMG!

[Bo Wang @BoWang87]

couldn’t agree more about the need for more computational biologists. More importantly, we must ensure they receive the recognition and support they deserve. Their work should never be dismissed as merely “just service”. Additionally, I’d like to remind everyone of the excellent paper titled ‘All Biology is Computational Biology’. 🧬 💻

[Jia-Xing Yue (岳家兴) @iAmphioxus]

Shout out for the 15th Chinese Conference on Yeasts and Fungi (June 14-17, 2024). This meeting is organized by the community and for the community, and it goes fully international now. Bonus: Nobel Laureate Dr. Paul Nurse has confirmed to attend the meeting!

[Gnome Anne May Perceive Me @annethegnome]

Lichen are a big deal on earth. First off, they’re GORGEOUS but also they cover 6–8% of Earth's land surface! We know of 20000 species but there are likely MANY MANY MORE.
We estimate that we’ve only discovered 10% of fungi, as opposed to 85% of plants.

[Anna Selmecki @AnnaSelmecki]

This is outstanding fungal #scicomm

[Wai Keen Vong @wkvong]

1/ Today in Science, we train a neural net from scratch through the eyes and ears of one child. The model learns to map words to visual referents, showing how grounded language learning from just one child's perspective is possible with today's AI tools. https://t.co/hPZiiQt6Vv

[Scott Coyle @CellRaiser_]

Our mammalian cell programmable reaction-diffusion plasmid pack is now on Addgene--everything you need to get started making waves, analyzing images with DSP, and interfacing with cell biology! Have fun and reach out if you need help/have questions 😵‍💫https://t.co/T4IVieWGre

[Cell @CellCellPress]

Now online! A 25-year odyssey of genomic technology advances and structural variant discovery https://t.co/LE6TyqVjA8

[Camille Goemans @camille_goemans]

Our new study led by @SakenovaNazgul from the @TypasLab at @embl is out ! If you want to learn more about inferring cross-resistance and collateral sensitivity between antibiotics from chemical genetics datasets, please check it out !
https://t.co/fJ2AGt0wF4

[yeast_papers @yeast_papers]

BioRxiv: Wild Patagonian yeast improve the evolutionary potential of novel interspecific hybrid strains for Lager brewing https://t.co/wfgFQrQAsj

[Michael Baym @baym]

How stable are bacterial genomes as they adapt to an environment? My collaboration with @anuraglimdi, @EvolSys, @RELenski, and @ten_olivier exploring this over 50,000 generations of evolution is out today!
1/
https://t.co/q7WwMo1LvY

[Stelkens Lab @StelkensLab]

We have a new paper out on the ecological basis of hybrid incompatibilities! We argue, via literature review, two meta-analyses, and simulations that epistatic incompatibilities might underlie much of what is known as 'extrinsic' post-zygotic isolation https://t.co/kblZWF0bhr 1/n