Hiroshi Otani

Scientist at the DOE Joint Genome Institute, Lawrence Berkeley National Laboratory

[Hiroshi Otani @HOtani_JGI]

@MattHutchings10 NGS as a readout fine? If not, I did qPCR when testing in vitro transcription protocols for RIViT-seq.

[Hiroshi Otani @HOtani_JGI]

@wildtypeMC Yes, that happened several times. Switching to a low copy number usually helped. Or you could transform the plasmid directly into the final host. Of course, the latter depends on your hosts and LUCK!

[Hiroshi Otani @HOtani_JGI]

Glad to see that multiple projects studying actinomycetes and secondary metabolism were chosen. Looking forward to learning what these projects will reveal.

[Joint Genome Institute @jgi]

Congrats to 6 #2023CSPFunctionalGenomics recipients selected to work w/the @JGI. Using our DNA synthesis & omics capabilities, they'll translate genomic information into biological function. See projects below (🧵)

@BerkeleyLab @DOEScience @SSURFacilities
https://t.co/BZiWEDJWkF

[Hiroshi Otani @HOtani_JGI]

Had great time @UniLeidenNews and @IUPAC NP meeting in Naples, Italy. Special thanks to @GillesvanWezel for hosting me in Leiden. Thank you all that attended my talks and had discussions with me. Let's continue or start working on something great!

[Hiroshi Otani @HOtani_JGI]

Glad to learn that our paper led by @SylviaKunakom is editor’s choice. https://t.co/5KJkwtibVh @SIMB_Microbio

[Frederik Schulz @frederikschu]

Interested in discovery of novel microbial pathogens and viruses?

We are currently looking for
2 Postdoctoral Fellows:
- https://t.co/azJs89k7tJ
- https://t.co/2Z1pxWz3g4

We would be excited to have you join our team! @jgi @BerkeleyLab

[Hiroshi Otani @HOtani_JGI]

@con_meehan And release the deposited files once the paper is accepted.

[Hiroshi Otani @HOtani_JGI]

Postdoc position at @jgi @BerkeleyLab in the Metabolomics Group. It's a great team to conduct metabolomics and other omics experiments and study microbe-plant interactions. https://t.co/kGg7eGSTFJ

[Dr. Casandra Newkirk @casscraze]

So I'm on the job market guys. I have had zero luck so far. I'm actually ideally looking to leave academia (it just no longer fits my goals) and stay in the North Carolina area for family reasons. So local or remote is great. Send leads please! (Skills in next tweet)

[Joint Genome Institute @jgi]

REGISTRATION IS NOW OPEN for the #JGI2023 User Meeting!

WHEN: Aug. 21-25

KEYNOTES: Evolutionary virologist Edward Holmes of @Sydney_Uni, microbial ecologist @BruceHungate of @NAU and molecular biologist Dianne Newman of
@Caltech.

More info 👇
https://t.co/N5s1zIS4d4

[Joint Genome Institute @jgi]

Marine microbial chemical biologist @Kate_Duncan of @UniStrathclyde will discuss "Linking Genes and Metabolites for Informed Antibiotic Discovery" at the #JGI2023 Annual Meeting. Registration now open: https://t.co/N5s1zIS4d4

[Joint Genome Institute @jgi]

.@MarnixMedema of Wageningen University @WUR will discuss "Deciphering the Chemical Language of the Microbiome" at the #JGI2023 Annual Meeting. Registration here👇 https://t.co/N5s1zIS4d4

[Hiroshi Otani @HOtani_JGI]

Less than a week to apply for the #postdocposition @jgi @LBNLBioSci @BerkeleyLab

[Hiroshi Otani @HOtani_JGI]

We are hiring another postdoc @jgi @BerkeleyLab to develop, advance and automate metabolite discovery platforms. Will work on fun collaborative projects with industrial and academic partners. Please spread the word. https://t.co/8Ju3NWuQIO

[Hiroshi Otani @HOtani_JGI]

We are hiring another postdoc @jgi @BerkeleyLab to develop, advance and automate metabolite discovery platforms. Will work on fun collaborative projects with industrial and academic partners. Please spread the word. https://t.co/8Ju3NWuQIO

[Paco Barona-Gomez @EvoDivMet]

Interested in #cyanobacteria (Nostocales), Nitrogen fixation, Symbiosis, Natural Products, please reach out to join me and collaborators in a CSP grant for @jgi. We are hoping to solve the mystery of BMAA biosynthesis and function amongst other things. Please RT and DM

[Hiroshi Otani @HOtani_JGI]

@ZachReitzPhD Keep your eye on JGI’s career page. There might be something coming up.

[Hiroshi Otani @HOtani_JGI]

@ykguitar1002000 antismash使う時にconda activateする必要はありますが、互換性の問題をトラブルシュートするよりは楽なはずです。

[Hiroshi Otani @HOtani_JGI]

@ykguitar1002000 https://t.co/q0ydB5p4qG
Antismash専用のconda environmentを作って、antismashと一緒にインストールされるパッケージを更新しなければ、互換性の問題は起きないはずです。

[Hiroshi Otani @HOtani_JGI]

@ykguitar1002000 Conda使えばその問題も起きないはずです。

[Marnix Medema @marnixmedema]

HIRING! Within the Marie-Curie ITN network MAGic-MOLFUN, @jjjvanderhooft and I are recruiting two PhD students! The projects focus on developing new tools for natural product metabolome and genome mining, respectively. Please RT!
https://t.co/sNdoko4uPz