Johan Henriksson

Group leader at MIMS, Sweden. Developing #multiomics / #systemsbiology approaches to understand #Tcells. #immunology #machinelearning @NordicEMBL

[Johan Henriksson @HenrikssonLab]

We can now infer #chromatin #condensation at the #singlecell level! Applied this to new #Bcell #multiome atlas, found out how #AID can avoid #cancer during #somatichypermutation https://t.co/u9P5PjEkub

[Itai Yanai @ItaiYanai]

Here are my 12 guidelines for data exploration and analysis with the right attitude for discovery:
1. You never really finish analyzing a dataset. You just decide to stop and move on at some point, leaving some things undiscovered. 🧵

[MIMS - Molecular Infection Medicine Sweden @mims_umea]

Researchers from @umeauniversity, in collaboration with international colleagues, established G-protein coupled receptors and neuropeptide mutant libraries of C. elegans using CRISPR/Cas9-based approaches. A powerful resource for screening, now published in @NatureComms.

[Johan Henriksson @HenrikssonLab]

Like hacking on new #technology? #interdisciplinary #postdoc position available in developing a new #microfluidics method for high-throughput #singlecell #wholegenomesequencing of #bacteria https://t.co/fjBAHZ3y9I

[Johan Henriksson @HenrikssonLab]

Also, we found that #atypical #monocytes are locked in a special #cellcycle stage by CDKN1C; regular #singlecell #RNAseq based cell cycle annotation missed this. #ATACseq is a very useful complement!

[Johan Henriksson @HenrikssonLab]

We can now infer #chromatin #condensation at the #singlecell level! Applied this to new #Bcell #multiome atlas, found out how #AID can avoid #cancer during #somatichypermutation https://t.co/u9P5PjEkub

[Johan Henriksson @HenrikssonLab]

#Lymphoma through random #mutagenesis avoided by #condensation, driven putatively by somewhat poorly studied #CDK13

[Johan Henriksson @HenrikssonLab]

#postdoc #CARTcell #CRISPR #screening #singlecell https://t.co/SwPVAuGOyB

[Johan Henriksson @HenrikssonLab]

#machinelearning #postdoc #VAE #singlecell
https://t.co/vC4xU28xQQ

[Johan Henriksson @HenrikssonLab]

#machinelearning #postdoc #textanalysis #semanticanalysis #VAE https://t.co/gGRHDznrmO

[Integrated Science Lab @IceLab_umea]

Seeking #postdocjobs - we want you! The IceLab #multidisciplinary postdoctoral fellowships are accepting applications now. You should have math & #computational modeling skills & a deep interest in working with empirical researchers. Welcome to IceLab! https://t.co/sTupurhLSR

[Johan Henriksson @HenrikssonLab]

@strategiskaSSF Swedish funders has to create options to hire prospect PhD students from UA. It would be an absolute win-win deal for this goldmine of talent

[Johan Henriksson @HenrikssonLab]

We wish to recruit a #phd or #postdoc for #bioinformatics methods development, #singlecell and #crispr on #CAR #Tcell. #python, #bayesianstatistics, #ml helpful! https://t.co/fCmWRuERu1

[Johan Henriksson @HenrikssonLab]

We wish to recruit a #phd or #postdoc for #bioinformatics methods development, #singlecell and #crispr on #CAR #Tcell. #python, #bayesianstatistics, #ml helpful! https://t.co/fCmWRuERu1

[Johan Henriksson @HenrikssonLab]

DAF regulates B cell selection in the GC!
https://t.co/zV4sfRZ0Q9

[Johan Henriksson @HenrikssonLab]

Congrats to our first 4 students passing their project course, #modelling #transcriptionfactors & #RBPs using #Tcell #RNAseq data!

[Johan Henriksson @HenrikssonLab]

Don't forget the most important thing of them all: color figures!

[Waggoner Lab @LabWaggoner]

T cell metabolism: new insights in systemic lupus erythematosus pathogenesis and therapy https://t.co/4FoFpPL47j

[Johan Henriksson @HenrikssonLab]

CyTOF against 110 metabolite transporters and enzymes in immune cells

[Johan Henriksson @HenrikssonLab]

Wetlab #postdoc position in #Tcell #systemsbiology available @NordicEMBL. Come help us reinvent #immunology! https://t.co/YlaN4rWs5L |
@humanimmunenews @ImmunologyNews @CdnImmunol @britsocimm @Immunopaedia @ASImmunology @sangerinstitute @embl @maxplanckphdnet

[Judith Zaugg @zauggj]

Our latest work on transcription factors showing mechanistic insights into how they cooperate and its functional impact - great collaboration with Janosch Hennig's group at @embl who experimentally validated our predictions. Thanks Jussi Taipale for generating this great dataset!