HopkinsQS

The Research Program in Quantitative Sciences develops and applies new quantitative methods for cancer biology at @HopkinsKimmel.

[HopkinsQS @HopkinsRPQS]

Excited to share our new website highlighting the work our faculty have done to advance #cancerreaseach @hopkinskimmel

https://t.co/MULXM6GIIt

[HopkinsQS @HopkinsRPQS]

More efficient techniques for metagenomics analysis https://t.co/ySl8HRmuI0 @BenLangmead

[HopkinsQS @HopkinsRPQS]

https://t.co/d6vBEHegcb

[Genome Biology @GenomeBiology]

Bing Ren, @KasperDHansen, @afhuming and co perform Hi-C on lymphoblastoid cell line from different individuals. They show that genetic variation influences multiple features of 3D chromatin conformation and map QTLs associated with these features https://t.co/UZbMVrN8Dq

[HopkinsQS @HopkinsRPQS]

New methods for cell type identification from blood https://t.co/qc7edyjMMG @stephaniehicks @rafalab

[HopkinsQS @HopkinsRPQS]

Excited new advances in quantitative research at @hopkinskimmel

[Johns Hopkins Kimmel Cancer Center @hopkinskimmel]

Experts across fields @johnshopkins and @HopkinsMedicine have created a collaboration to map tumors and explore the interactions between #pancreaticcancer cells and immune cells.

@lustgartenfdn
@TheMarkFdn
@JHUArtsSciences
@CBSNews

https://t.co/0IhGUZlEQS

[HopkinsQS @HopkinsRPQS]

New work by @karchinrachel and @ciacobu showing the power of computational genomics to study tumor models https://t.co/o237AJhW4K

[HopkinsQS @HopkinsRPQS]

Intraductal Papillary Mucinous Neoplasms Arise from Multiple Independent Clones, Each With Distinct Mutations. - PubMed - NCBI https://t.co/znOoew2wdg @KarchinRachel

[HopkinsQS @HopkinsRPQS]

A Distance-Based Kernel Association Test Based on the Generalized Linear Mixed Model for Correlated Microbiome Studies. - PubMed - NCBI https://t.co/xXROWJFyFA

[HopkinsQS @HopkinsRPQS]

New work by @HopkinsRPQS investigator Rob Scharpf and colleagues advancing #liquidbiopsy with machine learning.

[Tej D. Azad 🇺🇸 @tdazad]

Progress towards pan-cancer #LiquidBiopsy via genome-wide fragmentation patterns of cell-free DNA from @leal_md_sp @velculescu @hopkinskimmel in @nature

[Hopkins Med News @HopkinsMedNews]

New study details two new artificial intelligence methods that decipher complex gene activity and could offer insight into the treatment of disease. @HopkinsMedicine, @HopkinsKimmel, @HopkinsNeuro, @FertigLab https://t.co/P7jTgzK6Yy

[HopkinsQS @HopkinsRPQS]

https://t.co/zbBNlxV6k4 @princyparsana @mike_schatz @andrewejaffe @alexisjbattle @jtleek

[HopkinsQS @HopkinsRPQS]

https://t.co/5scqgyEsPA @FertigLab @SethBlackshaw @Brian_S_Clark @loyalgoff @GenesOfEve’s collaborative study on single cell analysis for retinal development @HopkinsKimmel @HopkinsMedNews

[Loyal Goff @loyalgoff]

Very excited to announce two papers from our group are out today. Amazing collaborations with @FertigLab & @sethblackshaw and led by @genesofeve & @Brian_S_Clark. The landscape of mouse retinal development using 10x scRNA-Seq. https://t.co/W9SKU0WOUO
https://t.co/HBmsAeAAlF (1/n)

[HopkinsQS @HopkinsRPQS]

@FertigLab and @loyalgoff introduce transfer learning for scRNA-seq analysis https://t.co/C70R7tt0Jf

[HopkinsQS @HopkinsRPQS]

@marchionniLab featured on machine learning for biological systems https://t.co/hPaTZs5S5M

[HopkinsQS @HopkinsRPQS]

Analysis of heritability and genetic architecture of Pancreatic Cancer: A PanC4 Study. - PubMed - NCBI https://t.co/kO3QNaO96D

[HopkinsQS @HopkinsRPQS]

A phase 1 trial of the oral DNA methyltransferase inhibitor CC-486 and the histone deacetylase inhibitor romidepsin in advanced solid tumors. - PubMed - NCBI https://t.co/AduQcpVaRQ

[HopkinsQS @HopkinsRPQS]

Incidence and distribution of UroSEEK gene panel in a multi-institutional cohort of bladder urothelial carcinoma. - PubMed - NCBI https://t.co/NrpUhdMb6r

[HopkinsQS @HopkinsRPQS]

Exciting new work for causal effects by @nilanjan10c @JHU_BDPs @HopkinsKimmel @JohnsHopkinsSPH https://t.co/ewOU29q3if

[HopkinsQS @HopkinsRPQS]

Tumor immune microenvironment in non-muscle invasive urothelial carcinoma of bladder. - PubMed - NCBI https://t.co/jwrIsHAYo7